STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48004.1DoxX family protein; InterPro IPR011637; KEGG: bcv:Bcav_3582 DoxX family protein; PFAM: DoxX family protein; SPTR: DoxX family protein; PFAM: DoxX. (196 aa)    
Predicted Functional Partners:
ADU47750.1
COGs: COG2897 Rhodanese-related sulfurtransferase; InterPro IPR001763: IPR001307; KEGG: ach:Achl_1659 rhodanese domain protein; PFAM: Rhodanese domain protein; PRIAM: Thiosulfate sulfurtransferase; SMART: Rhodanese domain protein; SPTR: Rhodanese domain protein; PFAM: Rhodanese-like domain.
     
  0.900
ADU48629.1
Rhodanese domain protein; COGs: COG2897 Rhodanese-related sulfurtransferase; InterPro IPR001763: IPR001307; KEGG: kfl:Kfla_3476 rhodanese domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: Rhodanese domain protein; PFAM: Rhodanese-like domain.
     
  0.900
ADU48622.1
KEGG: ske:Sked_14030 hypothetical protein; SPTR: DNA primase.
  
     0.464
ADU48002.1
ATPase associated with various cellular activities AAA_5; COGs: COG1401 GTPase subunit of restriction endonuclease; InterPro IPR011704: IPR003593; KEGG: bfa:Bfae_05450 GTPase subunit of restriction endonuclease; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; SPTR: ATPase family associated with various cellular activities (AAA), putative; PFAM: AAA domain (dynein-related subfamily).
       0.463
ADU48003.1
COGs: COG4268 McrBC 5-methylcytosine restriction system component; InterPro IPR019292; KEGG: cai:Caci_6960 hypothetical protein; PFAM: 5-methylcytosine restriction system component-like protein; SPTR: Putative uncharacterized protein; PFAM: McrBC 5-methylcytosine restriction system component.
       0.463
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
       0.449
ADU48005.1
COGs: COG2251 nuclease (RecB family); InterPro IPR019993; KEGG: gob:Gobs_3698 RecB family nuclease, putative; SPTR: RecB family nuclease, putative; TIGRFAM: RecB family nuclease, putative; TIGRFAM: RecB family nuclease, putative, TM0106 family.
       0.447
ADU49845.1
InterPro IPR011576; KEGG: cur:cur_0523 hypothetical protein; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: Putative uncharacterized protein; PFAM: Pyridoxamine 5'-phosphate oxidase.
 
     0.412
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.