STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48009.1Methicillin resistance protein; COGs: COG2348 Uncharacterized protein involved in methicillin resistance; InterPro IPR003447; KEGG: kfl:Kfla_7010 methicillin resistance protein; PFAM: Methicillin resistance protein; SPTR: Putative uncharacterized protein; PFAM: FemAB family. (421 aa)    
Predicted Functional Partners:
ADU48225.1
Alanine racemase domain protein; InterPro IPR000408: IPR001608; KEGG: nca:Noca_4674 alanine racemase domain-containing protein; PFAM: alanine racemase domain protein; SPTR: Alanine racemase domain protein; PFAM: Alanine racemase, N-terminal domain.
 
   
 0.795
ADU48008.1
KEGG: kfl:Kfla_6683 hypothetical protein; SPTR: Putative integral membrane protein.
       0.781
ADU48843.1
ErfK/YbiS/YcfS/YnhG family protein; InterPro IPR002477: IPR005490; KEGG: nca:Noca_0518 peptidoglycan binding domain-containing protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; SPTR: Lipoprotein; PFAM: Putative peptidoglycan binding domain; L,D-transpeptidase catalytic domain.
  
     0.769
ADU48007.1
KEGG: tbi:Tbis_2449 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.636
ADU48403.1
InterPro IPR002563; KEGG: nca:Noca_3103 flavin reductase domain-containing protein; PFAM: flavin reductase domain protein FMN-binding; SPTR: Flavin reductase domain protein, FMN-binding; PFAM: Flavin reductase like domain.
  
     0.611
ADU48006.1
ADP-ribosylation/Crystallin J1; COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502: IPR000387; KEGG: ske:Sked_03580 ADP-ribosylglycohydrolase; PFAM: ADP-ribosylation/Crystallin J1; SPTR: Putative ribosylglycohydrolase; PFAM: ADP-ribosylglycohydrolase.
 
     0.522
ADU47861.1
KEGG: nca:Noca_3344 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.465
ADU50041.1
phospholipase/Carboxylesterase; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR003140; KEGG: kfl:Kfla_4635 peptidase S9 prolyl oligopeptidase active site domain protein; PFAM: phospholipase/Carboxylesterase; SPTR: Peptidase S9 prolyl oligopeptidase active site domain protein; PFAM: Prolyl oligopeptidase family.
  
     0.458
ADU49089.1
Hypothetical protein; InterPro IPR006311; KEGG: sru:SRU_2417 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Extensin-like protein C-terminus.
  
     0.419
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.