STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48015.1KEGG: kse:Ksed_16720 hypothetical protein; SPTR: Putative uncharacterized protein. (276 aa)    
Predicted Functional Partners:
ADU48016.1
Protein of unknown function DUF1232; InterPro IPR010652; KEGG: tfu:Tfu_2752 hypothetical protein; PFAM: protein of unknown function DUF1232; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1232).
       0.823
ADU48017.1
KEGG: cfl:Cfla_2059 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.565
ADU48903.1
Hypothetical protein; InterPro IPR010916; KEGG: kse:Ksed_09580 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.538
ADU48014.1
Aminotransferase class I and II; COGs: COG1168 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities; InterPro IPR004839; KEGG: mmi:MMAR_3453 aminotransferase; PFAM: aminotransferase class I and II; SPTR: Putative transferase; PFAM: Aminotransferase class I and II.
       0.536
ADU46761.1
KEGG: kse:Ksed_01720 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.532
ADU48719.1
KEGG: kse:Ksed_09170 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.498
aat
leucyl/phenylalanyl-tRNA/protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.
 
     0.483
ADU47848.1
KEGG: kra:Krad_3756 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3618).
  
     0.424
ADU48013.1
COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterPro IPR002298: IPR001098; KEGG: fal:FRAAL3779 putative DNA polymerase I; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase; SPTR: Putative DNA polymerase I; PFAM: DNA polymerase family A.
       0.424
ADU49018.1
Bifunctional glucose-6-phosphate/mannose-6-phosphate isomerase; InterPro IPR019490: IPR006162; KEGG: kra:Krad_3839 putative transcriptional regulator, RpiR family; PFAM: Bifunctional glucose-6-phosphate/mannose-6-phosphate isomerase-like; SPTR: Putative uncharacterized protein; PFAM: Bacterial phospho-glucose isomerase C-terminal region.
  
     0.420
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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