STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48017.1KEGG: cfl:Cfla_2059 hypothetical protein; SPTR: Putative uncharacterized protein. (365 aa)    
Predicted Functional Partners:
ADU48987.1
KEGG: sco:SCO5242 integral membrane protein; SPTR: Putative integral membrane protein.
  
     0.619
ADU48016.1
Protein of unknown function DUF1232; InterPro IPR010652; KEGG: tfu:Tfu_2752 hypothetical protein; PFAM: protein of unknown function DUF1232; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1232).
 
     0.608
ADU47893.1
KEGG: nca:Noca_3532 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.586
ADU47422.1
KEGG: kse:Ksed_23860 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.576
ADU48015.1
KEGG: kse:Ksed_16720 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.565
ADU48549.1
KEGG: xce:Xcel_0944 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.561
ADU50040.1
CHAP domain containing protein; COGs: COG3942 Surface antigen; InterPro IPR007921; KEGG: ooe:OEOE_1430 cell wall hydrolase; PFAM: CHAP domain containing protein; SPTR: Cell wall-associated hydrolase with LysM domains; PFAM: CHAP domain.
  
     0.553
ADU47848.1
KEGG: kra:Krad_3756 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3618).
  
     0.540
ADU50106.1
KEGG: ske:Sked_37910 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.537
ADU49099.1
KEGG: ssl:SS1G_03268 hypothetical protein; SPTR: Predicted protein.
  
     0.531
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.