STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48075.1Transposase IS204/IS1001/IS1096/IS1165 family protein; COGs: COG3464 Transposase and inactivated derivatives; InterPro IPR002560; KEGG: mlu:Mlut_14300 transposase; PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; SPTR: Transposase; PFAM: Transposase. (420 aa)    
Predicted Functional Partners:
ADU48076.1
KEGG: sen:SACE_5253 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
       0.510
ADU47390.1
Integrase catalytic region; COGs: COG4584 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: dap:Dacet_2820 integrase catalytic region; PFAM: Integrase catalytic region; SPTR: Putative transposase; PFAM: Integrase core domain.
 
    0.492
ADU47658.1
Integrase catalytic region; COGs: COG4584 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: dap:Dacet_2820 integrase catalytic region; PFAM: Integrase catalytic region; SPTR: Putative transposase; PFAM: Integrase core domain.
 
    0.489
ADU48077.1
HAD-superfamily hydrolase, subfamily IIA; COGs: COG0647 sugar phosphatase of the HAD superfamily; InterPro IPR005834: IPR006357; KEGG: sro:Sros_6062 sugar phosphatase of the HAD superfamily-like protein; PFAM: Haloacid dehalogenase domain protein hydrolase; SPTR: Sugar phosphatase of the HAD superfamily-like protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid Dehalogenase Superfamily Class (subfamily) IIA.
       0.483
ADU47405.1
RNA-directed DNA polymerase; COGs: COG3344 Retron-type reverse transcriptase; InterPro IPR000477: IPR013597; KEGG: rha:RHA1_ro10191 RNA-directed DNA polymerase; PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; PRIAM: RNA-directed DNA polymerase; SPTR: RNA-directed DNA polymerase; PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain.
  
     0.449
ADU47391.1
IstB domain protein ATP-binding protein; COGs: COG1484 DNA replication protein; InterPro IPR003593: IPR002611; KEGG: rha:RHA1_ro06914 insertion sequence ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; SPTR: Probable insertion sequence ATP-binding protein; PFAM: IstB-like ATP binding protein.
 
     0.404
ADU47657.1
IstB domain protein ATP-binding protein; COGs: COG1484 DNA replication protein; InterPro IPR002611: IPR003593; KEGG: rha:RHA1_ro06914 insertion sequence ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase; SPTR: Probable insertion sequence ATP-binding protein; PFAM: IstB-like ATP binding protein.
 
     0.404
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.