STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48166.1KEGG: kfl:Kfla_2533 hypothetical protein; SPTR: Putative uncharacterized protein. (391 aa)    
Predicted Functional Partners:
ADU48162.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: sco:SCO2009 branched chain amino acid transport permease; PFAM: inner-membrane translocator; SPTR: Putative branched chain amino acid transport permease; PFAM: Branched-chain amino acid transport system / permease component.
       0.615
ADU48163.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: kfl:Kfla_3083 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: Putative branched chain amino acid transport permease; PFAM: Branched-chain amino acid transport system / permease component.
       0.615
ADU48164.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593: IPR003439: IPR018170; KEGG: kfl:Kfla_3084 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter.
       0.615
ADU48165.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003593: IPR003439: IPR017871; KEGG: kfl:Kfla_3085 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative branched chain amino acid transport ATP-binding protein; PFAM: ABC transporter.
       0.615
ADU48167.1
InterPro IPR000182; KEGG: kra:Krad_2952 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Putative uncharacterized protein; PFAM: Acetyltransferase (GNAT) family.
       0.458
ADU48161.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: kfl:Kfla_3081 extracellular ligand-binding receptor; PFAM: Extracellular ligand-binding receptor; SPTR: Putative branched chain amino acid binding protein; PFAM: Receptor family ligand binding region.
       0.436
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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