STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48172.1Hypothetical protein; KEGG: ami:Amir_0041 copper resistance protein CopC; SPTR: Copper resistance protein CopC. (65 aa)    
Predicted Functional Partners:
ADU48173.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: nca:Noca_3000 glycosyl transferase, group 1; PFAM: glycosyl transferase group 1; SPTR: Putative glycosyltransferase; PFAM: Glycosyl transferases group 1.
       0.682
ADU48174.1
Methyltransferase type 11; InterPro IPR013216; KEGG: amd:AMED_7530 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methylase involved in ubiquinone/menaquinone biosynthesis-like protein; PFAM: Methyltransferase domain.
       0.682
ADU48175.1
InterPro IPR000421; KEGG: kfl:Kfla_3096 coagulation factor 5/8 type domain protein; PFAM: coagulation factor 5/8 type domain protein; SPTR: Coagulation factor 5/8 type domain protein; PFAM: Domain of unknown function (DUF3367).
       0.682
ADU48171.1
Hypothetical protein; InterPro IPR005829; KEGG: saq:Sare_0209 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.516
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.