STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48209.1NUDIX hydrolase; COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182: IPR020476: IPR020084: IPR000086; KEGG: kfl:Kfla_4957 NUDIX hydrolase; PFAM: NUDIX hydrolase; GCN5-related N-acetyltransferase; SPTR: NUDIX hydrolase; PFAM: Acetyltransferase (GNAT) family; NUDIX domain; Belongs to the Nudix hydrolase family. (311 aa)    
Predicted Functional Partners:
ADU48210.1
Cytochrome oxidase assembly; COGs: COG1612 Uncharacterized protein required for cytochrome oxidase assembly; InterPro IPR003780; KEGG: kse:Ksed_13300 uncharacterized protein required for cytochrome oxidase assembly; PFAM: cytochrome oxidase assembly; SPTR: Putative cytochrome c oxidase subunit XV assembly protein; PFAM: Cytochrome oxidase assembly protein.
 
     0.707
rnc
RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
  
    0.581
ADU48211.1
KEGG: sro:Sros_6098 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.465
ADU48213.1
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593: IPR003439: IPR017871; KEGG: kra:Krad_2919 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC-type multidrug transport system ATPase componen; PFAM: ABC transporter.
 
     0.452
ADU47745.1
KEGG: cfl:Cfla_0613 NLP/P60 protein; SPTR: Putative uncharacterized protein.
  
     0.440
ADU48212.1
ABC-2 type transporter; InterPro IPR013525; KEGG: kse:Ksed_13310 ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter; SPTR: ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter; TIGRFAM: ABC transporter efflux protein, DrrB family.
 
     0.434
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
  
  
 0.427
ADU47456.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362: IPR017475: IPR017871; KEGG: bfa:Bfae_02670 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate galactos [...]
  
  
 0.426
ADU47249.1
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.422
ADU47653.1
COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: xce:Xcel_2582 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyl transferase family 2; PFAM: Glycosyl transferase family 2.
  
  
 0.400
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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