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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48228.1KEGG: ami:Amir_1238 hypothetical protein; SPTR: Putative uncharacterized protein. (70 aa)    
Predicted Functional Partners:
ADU48227.1
COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593: IPR003439: IPR017871; KEGG: kse:Ksed_13460 ATPase component of ABC transporters with duplicated ATPase domain; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative ABC transporter ATP binding protein; PFAM: ABC transporter.
       0.612
ADU48229.1
ABC transporter related protein; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterProIPR003593: IPR003439: IPR017940: IPR017871: IPR 001140; KEGG: kfl:Kfla_3305 ABC transporter related protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; SPTR: ABC-type multidrug transport system ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter.
       0.486
ADU48225.1
Alanine racemase domain protein; InterPro IPR000408: IPR001608; KEGG: nca:Noca_4674 alanine racemase domain-containing protein; PFAM: alanine racemase domain protein; SPTR: Alanine racemase domain protein; PFAM: Alanine racemase, N-terminal domain.
       0.421
ADU48226.1
Methicillin resistance protein; COGs: COG2348 Uncharacterized protein involved in methicillin resistance; InterPro IPR003447; KEGG: kfl:Kfla_7010 methicillin resistance protein; PFAM: Methicillin resistance protein; SPTR: Methicillin resistance protein; PFAM: FemAB family.
       0.421
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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