STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48233.1KEGG: tcu:Tcur_2268 hypothetical protein; SPTR: Putative uncharacterized protein. (80 aa)    
Predicted Functional Partners:
ADU48234.1
KEGG: bcv:Bcav_2323 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3099).
 
     0.847
ADU47716.1
Phosphoesterase HXTX; COGs: COG1514 2'-5' RNA ligase; InterPro IPR014051; KEGG: kfl:Kfla_1321 phosphoesterase HXTX; PFAM: Phosphoesterase HXTX; SPTR: Putative secreted protein; PFAM: 2',5' RNA ligase family.
  
     0.622
ADU48235.1
3-oxoacyl-(acyl-carrier-protein) reductase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347: IPR002198: IPR011284; KEGG: mlu:Mlut_11580 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: 3-oxoacyl-[acyl-carrier protein] reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase.
       0.551
ADU48236.1
Enoyl-(acyl-carrier-protein) reductase (NADH); COGs: COG0623 Enoyl-(acyl-carrier-protein); InterPro IPR002198; KEGG: cfl:Cfla_1687 short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: Enoyl-(Acyl carrier protein) reductase; PFAM: short chain dehydrogenase.
       0.501
ADU47523.1
KEGG: kra:Krad_1108 secreted protein; SPTR: Secreted protein.
  
     0.415
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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