STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48243.1KEGG: kse:Ksed_13550 hypothetical protein; SPTR: Putative uncharacterized protein. (272 aa)    
Predicted Functional Partners:
ADU48242.1
LmbE family protein; COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: nml:Namu_4797 LmbE family protein; PFAM: LmbE family protein; SPTR: Putative uncharacterized protein; PFAM: GlcNAc-PI de-N-acetylase.
 
     0.801
ADU48488.1
KEGG: fre:Franean1_1818 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.758
ADU47952.1
Peptidoglycan-binding lysin domain; InterPro IPR018392; KEGG: kse:Ksed_17220 LysM domain-containing protein; PFAM: Peptidoglycan-binding lysin domain; SPTR: Putative uncharacterized protein; PFAM: LysM domain.
  
     0.754
ADU47422.1
KEGG: kse:Ksed_23860 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.737
ADU48244.1
ABC transporter related protein; COGs: COG1119 ABC-type molybdenum transport system ATPase component/photorepair protein PhrA; InterPro IPR003593: IPR003439; KEGG: kse:Ksed_13560 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA; PFAM: ABC transporter.
 
     0.705
ADU48546.1
KEGG: kse:Ksed_12170 hypothetical protein; SPTR: Methionine aminopeptidase.
  
     0.688
ADU48245.1
Protein of unknown function DUF107; COGs: COG1585 Membrane protein implicated in regulation of membrane protease activity; InterPro IPR002810; KEGG: kra:Krad_3088 protein of unknown function DUF107; PFAM: protein of unknown function DUF107; SPTR: Putative integral membrane protein; PFAM: NfeD-like.
     
 0.681
ADU50107.1
KEGG: cfl:Cfla_3716 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.669
ADU48903.1
Hypothetical protein; InterPro IPR010916; KEGG: kse:Ksed_09580 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.657
ADU48948.1
KEGG: ach:Achl_2346 hypothetical protein; SPTR: ATP synthase protein I.
  
     0.635
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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