STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADU48257.1KEGG: ske:Sked_04540 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1396). (266 aa)    
Predicted Functional Partners:
ADU48258.1
KEGG: bfa:Bfae_16260 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.729
ADU48535.1
KEGG: ske:Sked_02620 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.681
ADU48167.1
InterPro IPR000182; KEGG: kra:Krad_2952 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Putative uncharacterized protein; PFAM: Acetyltransferase (GNAT) family.
  
     0.616
ADU48243.1
KEGG: kse:Ksed_13550 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.613
ADU47793.1
InterPro IPR002477; KEGG: sna:Snas_2804 peptidoglycan-binding domain 1 protein; PFAM: Peptidoglycan-binding domain 1 protein; SPTR: Putative uncharacterized protein; PFAM: Putative peptidoglycan binding domain.
  
     0.606
ADU48256.1
KEGG: kra:Krad_1816 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.541
ADU46818.1
Hypothetical protein; InterPro IPR017517; KEGG: tcu:Tcur_3849 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain; TIGRFAM: uncharacterized Actinobacterial protein TIGR03083.
  
     0.502
ADU46877.1
KEGG: mgi:Mflv_0689 transposase IS116/IS110/IS902 family protein; SPTR: Putative IS110 family transposase; PFAM: Transposase.
  
     0.477
ADU47848.1
KEGG: kra:Krad_3756 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3618).
  
     0.434
ADU46906.1
Hypothetical protein; KEGG: cre:CHLREDRAFT_6783 SNF2 superfamily protein; SPTR: Putative uncharacterized protein.
  
     0.419
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.