STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48258.1KEGG: bfa:Bfae_16260 hypothetical protein; SPTR: Putative uncharacterized protein. (163 aa)    
Predicted Functional Partners:
ADU48256.1
KEGG: kra:Krad_1816 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.790
ADU48257.1
KEGG: ske:Sked_04540 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1396).
 
     0.730
ADU48986.1
Lipolytic protein G-D-S-L family; InterPro IPR001087; KEGG: kse:Ksed_18470 hypothetical protein; PFAM: lipolytic protein G-D-S-L family; SPTR: Putative uncharacterized protein; PFAM: GDSL-like Lipase/Acylhydrolase.
  
     0.705
ADU48140.1
KEGG: cfl:Cfla_1864 protein of unknown function DUF2581; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2581).
  
     0.656
ADU48546.1
KEGG: kse:Ksed_12170 hypothetical protein; SPTR: Methionine aminopeptidase.
  
     0.656
ADU48472.1
KEGG: kra:Krad_3230 hypothetical protein; SPTR: Putative transcriptional regulatory protein; TIGRFAM: DNA binding domain, excisionase family.
  
     0.633
ADU48243.1
KEGG: kse:Ksed_13550 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.625
ADU47517.1
KEGG: kse:Ksed_07270 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.608
ADU49423.1
KEGG: cfl:Cfla_0662 putative lipoprotein; SPTR: Putative lipoprotein.
  
     0.589
ADU48537.1
KEGG: kra:Krad_3289 integral membrane protein; SPTR: Integral membrane protein.
  
     0.580
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.