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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48301.1L-lysine 2,3-aminomutase; COGs: COG1509 Lysine 2 3-aminomutase; InterPro IPR007197; KEGG: kfl:Kfla_3605 lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; PRIAM: Lysine 2,3-aminomutase; SPTR: L-lysine 2,3-aminomutase; TIGRFAM: KamA family protein. (483 aa)    
Predicted Functional Partners:
ADU48304.1
InterPro IPR006158; KEGG: nca:Noca_2664 beta-lysine 5,6-aminomutase beta subunit / D-lysine 5,6-aminomutase beta subunit; PFAM: cobalamin B12-binding domain protein; SPTR: Beta-lysine 5,6-aminomutase beta subunit / D-lysine 5,6-aminomutase beta subunit; PFAM: B12 binding domain.
 
  
 0.986
ADU48303.1
InterPro IPR015130; KEGG: kfl:Kfla_3602 D-lysine 56-aminomutase alpha subunit; PFAM: D-Lysine 56-aminomutase alpha subunit; SPTR: Lysine 5,6-aminomutase alpha subunit; PFAM: D-Lysine 5,6-aminomutase alpha subunit.
 
  
 0.983
ADU48302.1
KEGG: kfl:Kfla_3604 L-erythro-3,5-diaminohexanoate dehydrogenase; SPTR: Zn-dependent alcohol dehydrogenase and related dehydrogenase protein; PFAM: Zinc-binding dehydrogenase.
 
     0.900
ADU48305.1
InterPro IPR006683; KEGG: sna:Snas_3948 3-aminobutyryl-CoA ammonia-lyase; PFAM: thioesterase superfamily protein; SPTR: Putative uncharacterized protein; PFAM: Thioesterase superfamily.
 
   
 0.856
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
     
 0.806
ADU49438.1
3-keto-5-aminohexanoate cleavage enzyme; COGs: COG3246 conserved hypothetical protein; InterPro IPR008567; KEGG: kfl:Kfla_0987 protein of unknown function DUF849; PFAM: protein of unknown function DUF849; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic protein of unknown function (DUF849).
 
   
 0.678
ADU48300.1
Regulatory protein TetR; InterPro IPR001647; KEGG: sen:SACE_6360 TetR/AcrR family transcriptional regulator; PFAM: regulatory protein TetR; SPTR: Transcriptional regulator (TetR/AcrR family); manually curated; PFAM: Bacterial regulatory proteins, tetR family.
 
     0.629
ADU48299.1
ybaK/ebsC protein; COGs: COG2606 conserved hypothetical protein; InterPro IPR007214: IPR004369; KEGG: sco:SCO2058 transcriptional regulatory protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; SPTR: Putative transcriptional regulator; TIGRFAM: ybaK/ebsC protein; PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein.
       0.608
ADU48298.1
Drug resistance transporter, Bcr/CflA subfamily; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701: IPR004812; KEGG: xal:XALc_0877 Probable major facilitator superfamily. transmembrane protein; PFAM: major facilitator superfamily MFS_1; SPTR: Probable major facilitator superfamily. transmembrane protein; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily.
       0.580
ADU47515.1
Hypothetical protein; InterPro IPR000560: IPR006230; KEGG: stp:Strop_2268 hypothetical protein; SPTR: Glutamate mutase, mutL; TIGRFAM: conserved hypothetical protein.
 
     0.564
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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