STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48304.1InterPro IPR006158; KEGG: nca:Noca_2664 beta-lysine 5,6-aminomutase beta subunit / D-lysine 5,6-aminomutase beta subunit; PFAM: cobalamin B12-binding domain protein; SPTR: Beta-lysine 5,6-aminomutase beta subunit / D-lysine 5,6-aminomutase beta subunit; PFAM: B12 binding domain. (249 aa)    
Predicted Functional Partners:
ADU48303.1
InterPro IPR015130; KEGG: kfl:Kfla_3602 D-lysine 56-aminomutase alpha subunit; PFAM: D-Lysine 56-aminomutase alpha subunit; SPTR: Lysine 5,6-aminomutase alpha subunit; PFAM: D-Lysine 5,6-aminomutase alpha subunit.
  
  0.999
ADU48302.1
KEGG: kfl:Kfla_3604 L-erythro-3,5-diaminohexanoate dehydrogenase; SPTR: Zn-dependent alcohol dehydrogenase and related dehydrogenase protein; PFAM: Zinc-binding dehydrogenase.
 
 
 0.990
ADU48301.1
L-lysine 2,3-aminomutase; COGs: COG1509 Lysine 2 3-aminomutase; InterPro IPR007197; KEGG: kfl:Kfla_3605 lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein; PRIAM: Lysine 2,3-aminomutase; SPTR: L-lysine 2,3-aminomutase; TIGRFAM: KamA family protein.
 
  
 0.986
ADU48305.1
InterPro IPR006683; KEGG: sna:Snas_3948 3-aminobutyryl-CoA ammonia-lyase; PFAM: thioesterase superfamily protein; SPTR: Putative uncharacterized protein; PFAM: Thioesterase superfamily.
 
     0.959
ADU47515.1
Hypothetical protein; InterPro IPR000560: IPR006230; KEGG: stp:Strop_2268 hypothetical protein; SPTR: Glutamate mutase, mutL; TIGRFAM: conserved hypothetical protein.
 
     0.815
ADU49438.1
3-keto-5-aminohexanoate cleavage enzyme; COGs: COG3246 conserved hypothetical protein; InterPro IPR008567; KEGG: kfl:Kfla_0987 protein of unknown function DUF849; PFAM: protein of unknown function DUF849; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic protein of unknown function (DUF849).
 
     0.780
lnt
Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
       0.683
ADU48308.1
FxsA cytoplasmic membrane protein; COGs: COG3030 Protein affecting phage T7 exclusion by the F plasmid; InterPro IPR007313; KEGG: kfl:Kfla_3598 FxsA cytoplasmic membrane protein; PFAM: FxsA cytoplasmic membrane protein; SPTR: FxsA cytoplasmic membrane protein; PFAM: FxsA cytoplasmic membrane protein.
       0.656
ADU48307.1
Dolichyl-phosphate beta-D-mannosyltransferase; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: kse:Ksed_14090 glycosyl transferase; PFAM: glycosyl transferase family 2; PRIAM: Dolichyl-phosphate beta-D-mannosyltransferase; SPTR: Putative glycosyl transferase; PFAM: Glycosyl transferase family 2.
       0.647
ADU48268.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
  
  
 0.521
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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