STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48311.1KEGG: ahe:Arch_0138 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated. (241 aa)    
Predicted Functional Partners:
ADU48312.1
Hypothetical protein; COGs: COG3559 Putative exporter of polyketide antibiotics; KEGG: tbi:Tbis_3202 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.580
ADU48313.1
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593: IPR003439: IPR017871; KEGG: tbi:Tbis_3201 ABC transporter-like protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter.
       0.580
ADU48310.1
COGs: COG2270 Permease of the major facilitator superfamily; InterPro IPR011701; KEGG: kse:Ksed_14630 major facilitator superfamily permease; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily permease; PFAM: Vacuole effluxer Atg22 like.
       0.536
ADU48770.1
Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR017200: IPR007197; KEGG: nca:Noca_4381 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily.
 
     0.431
ADU48314.1
KEGG: cwo:Cwoe_5391 hypothetical protein; SPTR: Putative transcriptional regulator.
       0.429
ADU49882.1
KEGG: nca:Noca_2102 hypothetical protein; SPTR: Conserved hypothetical membrane protein.
 
     0.424
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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