STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48314.1KEGG: cwo:Cwoe_5391 hypothetical protein; SPTR: Putative transcriptional regulator. (172 aa)    
Predicted Functional Partners:
ADU48312.1
Hypothetical protein; COGs: COG3559 Putative exporter of polyketide antibiotics; KEGG: tbi:Tbis_3202 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.668
ADU48313.1
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593: IPR003439: IPR017871; KEGG: tbi:Tbis_3201 ABC transporter-like protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter.
 
     0.661
ADU48315.1
23S rRNA m(5)U-747 methyltransferase; COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase; InterPro IPR010280; KEGG: ach:Achl_1142 23S rRNA methyluridine methyltransferase; PFAM: (Uracil-5)-methyltransferase; SPTR: 23S rRNA (Uracil-5-)-methyltransferase RumB; PFAM: tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumB; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
       0.508
ADU48316.1
Protein of unknown function UCP012608; COGs: COG4427 conserved hypothetical protein; InterPro IPR000276: IPR011200; KEGG: amd:AMED_1098 hypothetical protein; PFAM: protein of unknown function UCP012608; SPTR: Uncharacterized conserved protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2332).
       0.508
ADU50072.1
Transcriptional regulator, MerR family; COGs: COG0789 transcriptional regulator protein; InterPro IPR000551; KEGG: kra:Krad_2015 putative transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: Putative transcriptional regulator, MerR family; PFAM: MerR family regulatory protein.
  
   
 0.507
ADU47000.1
KEGG: nfa:nfa23340 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.495
ADU47163.1
KEGG: rer:RER_17720 hypothetical protein; SPTR: Hypothetical membrane protein; PFAM: SPW repeat.
  
     0.431
ADU48311.1
KEGG: ahe:Arch_0138 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
       0.429
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.