STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48318.1Filamentation induced by cAMP protein Fic; COGs: COG3177 conserved hypothetical protein; InterPro IPR003812; KEGG: ske:Sked_33230 hypothetical protein; PFAM: filamentation induced by cAMP protein Fic; SPTR: Filamentation induced by cAMP protein Fic; PFAM: Fic/DOC family. (394 aa)    
Predicted Functional Partners:
ADU48317.1
Alpha amylase catalytic region; COGs: COG0366 Glycosidase; InterPro IPR006589: IPR006047; KEGG: nca:Noca_1267 alpha amylase, catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Alpha amylase, catalytic region; PFAM: Alpha amylase, catalytic domain.
       0.678
ADU48319.1
COGs: COG0009 Putative translation factor (SUA5); InterPro IPR006070: IPR004388; KEGG: ami:Amir_4990 SUA5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SPTR: Putative uncharacterized protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; Belongs to the SUA5 family.
       0.605
ADU49179.1
Phage/plasmid primase, P4 family; COGs: COG3378 ATPase; InterPro IPR014015: IPR006500: IPR014818; KEGG: mra:MRA_1593 putative phiRv1 phage protein; PFAM: primase P4; SPTR: Probable phiRv1 phage protein; TIGRFAM: phage/plasmid primase, P4 family; PFAM: Poxvirus D5 protein-like; D5 N terminal like; TIGRFAM: phage/plasmid primase, P4 family, C-terminal domain.
      
 0.564
ADU46869.1
Hypothetical protein; COGs: COG1373 ATPase (AAA+ superfamily); KEGG: fal:FRAAL3336 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.549
ADU48320.1
KEGG: nca:Noca_0955 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.496
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
    
 
 0.451
ADU48462.1
Protein of unknown function DUF456; InterPro IPR007403; KEGG: mjl:Mjls_0085 hypothetical protein; PFAM: protein of unknown function DUF456; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF456).
  
     0.414
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.