STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ADU48379.1COGs: COG3303 Formate-dependent nitrite reductase periplasmic cytochrome c552 subunit; InterPro IPR003321: IPR011031; KEGG: ahe:Arch_1474 nitrite reductase (cytochrome; ammonia-forming); PFAM: cytochrome c552; PRIAM: Nitrite reductase (cytochrome; ammonia-forming); SPTR: Nitrite reductase (Cytochrome; ammonia-forming); PFAM: Cytochrome c552; Belongs to the cytochrome c-552 family. (481 aa)    
Predicted Functional Partners:
ADU48380.1
COGs: COG3005 Nitrate/TMAO reductase membrane-bound tetraheme cytochrome c subunit; InterPro IPR017571: IPR011031; KEGG: ahe:Arch_1475 cytochrome c nitrate reductase, small subunit; SPTR: Cytochrome c nitrate reductase, small subunit; TIGRFAM: cytochrome c nitrate reductase, small subunit; PFAM: NapC/NirT cytochrome c family, N-terminal region; TIGRFAM: cytochrome c nitrate reductase, small subunit.
 
 0.999
ADU48382.1
NapC/NirT cytochrome c domain protein; InterPro IPR005126: IPR011031; KEGG: gem:GM21_1063 hypothetical protein; PFAM: NapC/NirT cytochrome c domain protein; SPTR: Putative uncharacterized protein; PFAM: NapC/NirT cytochrome c family, N-terminal region.
 
 
 0.952
ADU46935.1
COGs: COG5013 Nitrate reductase alpha subunit; InterPro IPR006656: IPR006657: IPR006655: IPR006468; KEGG: nca:Noca_1346 respiratory nitrate reductase alpha subunit apoprotein; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; PRIAM: Nitrate reductase; SPTR: Respiratory nitrate reductase alpha subunit apoprotein; TIGRFAM: nitrate reductase, alpha subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: respiratory nitrate reductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
 
 0.917
ADU49234.1
COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR014362: IPR006095: IPR006097: IPR006096; KEGG: nfa:nfa45920 glutamate dehydrogenase; PFAM: Glu/Leu/Phe/Val dehydrogenase; Glu/Leu/Phe/Val dehydrogenase dimerisation region; PRIAM: Glutamate dehydrogenase (NADP(+)); SPTR: Putative glutamate dehydrogenase; PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.915
ADU48539.1
COGs: COG0174 Glutamine synthetase; InterPro IPR008147: IPR008146: IPR004809; KEGG: kra:Krad_3291 glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; SPTR: Glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I.
     
 0.906
ADU48543.1
COGs: COG0174 Glutamine synthetase; InterPro IPR008147: IPR008146; KEGG: tbi:Tbis_1258 glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; PRIAM: Glutamate--ammonia ligase; SPTR: Glutamine synthetase type I; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I.
     
 0.906
ADU48858.1
COGs: COG0174 Glutamine synthetase; InterPro IPR008146; KEGG: ace:Acel_1851 L-glutamine synthetase; PFAM: glutamine synthetase catalytic region; PRIAM: Glutamate--ammonia ligase; SPTR: Putative glutamine synthetase; PFAM: Glutamine synthetase, catalytic domain.
     
 0.906
ADU49883.1
Nitrite reductase (NO-forming); COGs: COG2132 Putative multicopper oxidase; InterPro IPR011707: IPR001287; KEGG: nca:Noca_2101 multicopper oxidase, type 3; PFAM: multicopper oxidase type 3; PRIAM: Nitrite reductase (NO-forming); SPTR: Copper-containing nitrite reductase; PFAM: Multicopper oxidase; TIGRFAM: nitrite reductase, copper-containing.
     
 0.906
ADU46934.1
COGs: COG1140 Nitrate reductase beta subunit; InterPro IPR017896: IPR006547; KEGG: kfl:Kfla_4151 nitrate reductase, beta subunit; SPTR: Nitrate reductase, beta subunit; TIGRFAM: nitrate reductase, beta subunit; TIGRFAM: nitrate reductase, beta subunit.
     
 0.904
ADU46932.1
COGs: COG2181 Nitrate reductase gamma subunit; InterPro IPR003816; KEGG: nca:Noca_1349 respiratory nitrate reductase gamma subunit; PFAM: Nitrate reductase gamma subunit; PRIAM: Nitrate reductase; SPTR: Respiratory nitrate reductase gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit; PFAM: Nitrate reductase gamma subunit; TIGRFAM: respiratory nitrate reductase, gamma subunit.
   
 
 0.903
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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