STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48385.1COGs: COG1333 ResB protein required for cytochrome c biosynthesis; KEGG: ahe:Arch_1471 ResB family protein; SPTR: ResB family protein; PFAM: ResB-like family. (514 aa)    
Predicted Functional Partners:
ADU48384.1
COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR002541: IPR017562; KEGG: ahe:Arch_1470 cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; SPTR: Cytochrome c-type biogenesis protein CcsB; TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB.
 
  
 0.971
ADU47213.1
COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR002541: IPR017562; KEGG: kra:Krad_0631 cytochrome c assembly protein; PFAM: cytochrome c assembly protein; SPTR: Putative cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB.
 
  
 0.905
ADU48386.1
COGs: COG0785 Cytochrome c biogenesis protein; InterPro IPR003834; KEGG: ahe:Arch_1472 cytochrome c biogenesis protein transmembrane region; PFAM: cytochrome c biogenesis protein transmembrane region; SPTR: Cytochrome c biogenesis protein transmembrane region; PFAM: Cytochrome C biogenesis protein transmembrane region.
 
  
 0.845
ADU47210.1
Redoxin domain protein; InterPro IPR017909: IPR017936: IPR013740; KEGG: kse:Ksed_24350 thiol-disulfide isomerase-like thioredoxin; PFAM: Redoxin domain protein; SPTR: Putative uncharacterized protein; PFAM: Redoxin.
  
  
 0.775
ADU48383.1
COGs: COG1225 Peroxiredoxin; InterPro IPR000866: IPR017936; KEGG: ahe:Arch_1469 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; PFAM: AhpC/TSA family.
 
  
 0.687
ADU47205.1
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR000878: IPR003754: IPR003043; KEGG: kra:Krad_0619 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; SPTR: Putative uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase; PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; Uroporphyrinogen-III synthase HemD.
  
    0.649
ADU48387.1
Tetratricopeptide repeat; InterPro IPR019734: IPR013026; KEGG: ahe:Arch_1473 tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; SPTR: Tetratricopeptide TPR_2 repeat protein.
 
     0.648
ADU47211.1
COGs: COG0785 Cytochrome c biogenesis protein; InterPro IPR003834; KEGG: kse:Ksed_24340 cytochrome c biogenesis protein; PFAM: cytochrome c biogenesis protein transmembrane region; SPTR: Putative cytochrome biogenesis related protein; PFAM: Cytochrome C biogenesis protein transmembrane region.
 
  
 0.641
ADU47582.1
COGs: COG0785 Cytochrome c biogenesis protein; InterPro IPR003834; KEGG: sco:SCO5994 integral membrane cytochrome biogenesis protein; PFAM: cytochrome c biogenesis protein transmembrane region; SPTR: Putative integral membrane cytochrome biogenesis protein; PFAM: Cytochrome C biogenesis protein transmembrane region.
  
  
 0.588
ADU49479.1
COGs: COG0785 Cytochrome c biogenesis protein; InterPro IPR003834; KEGG: cfl:Cfla_0355 cytochrome c biogenesis protein transmembrane region; PFAM: cytochrome c biogenesis protein transmembrane region; SPTR: Cytochrome c biogenesis protein transmembrane region; PFAM: Cytochrome C biogenesis protein transmembrane region.
  
  
 0.588
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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