STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48390.1NHL repeat containing protein; COGs: COG3391 conserved hypothetical protein; InterPro IPR001258: IPR013017; KEGG: chy:CHY_0222 NHL repeat-containing protein; PFAM: NHL repeat containing protein; SPTR: NHL repeat protein; PFAM: NHL repeat. (361 aa)    
Predicted Functional Partners:
ADU48391.1
InterPro IPR001440: IPR019734: IPR013026; KEGG: cyp:PCC8801_1300 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: TPR repeat-containing protein; PFAM: Tetratricopeptide repeat.
 
     0.883
ADU48494.1
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor; InterPro IPR003088: IPR009152: IPR009056; KEGG: kse:Ksed_16190 cytochrome c, mono- and diheme variants family; PFAM: cytochrome c class I; SPTR: Cytochrome C heme-binding subunit; PFAM: Cytochrome c.
  
 
 0.868
ADU48388.1
Cytochrome C family protein; InterPro IPR010177: IPR011031; KEGG: rfr:Rfer_0259 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: cytochrome C family protein; PFAM: Doubled CXXCH motif (Paired_CXXCH_1); TIGRFAM: doubled CXXCH domain.
 
   
 0.642
ADU48595.1
Cadherin; InterPro IPR002126: IPR006626; KEGG: mlo:mll4444 hypothetical protein; PFAM: Cadherin; SMART: Cadherin; Parallel beta-helix repeat; SPTR: Mll4444 protein.
 
 
 
 0.560
ADU46853.1
Nitric oxide reductase, NorZ apoprotein; COGs: COG3256 Nitric oxide reductase large subunit; InterPro IPR000883; KEGG: mjl:Mjls_1539 nitric-oxide reductase subunit B; PFAM: cytochrome c oxidase subunit I; SPTR: Nitric oxide reductase; PFAM: Cytochrome C and Quinol oxidase polypeptide I.
  
 
 0.515
ADU49055.1
KEGG: kfl:Kfla_5332 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.503
ADU48389.1
Cytochrome C family protein; InterPro IPR010177: IPR011031; KEGG: tjr:TherJR_1122 cytochrome c family protein; SPTR: Cytochrome C family protein; TIGRFAM: cytochrome C family protein; PFAM: Doubled CXXCH motif (Paired_CXXCH_1); TIGRFAM: doubled CXXCH domain.
       0.483
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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