STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48404.1Hypothetical protein; InterPro IPR010916; KEGG: gob:Gobs_3189 MOSC domain protein beta barrel domain protein; SPTR: MOSC domain protein beta barrel domain protein. (138 aa)    
Predicted Functional Partners:
ADU48403.1
InterPro IPR002563; KEGG: nca:Noca_3103 flavin reductase domain-containing protein; PFAM: flavin reductase domain protein FMN-binding; SPTR: Flavin reductase domain protein, FMN-binding; PFAM: Flavin reductase like domain.
  
    0.785
ADU48406.1
Aminotransferase class IV; COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544: IPR018300; KEGG: sma:SAV_6804 D-alanine aminotransferase; PFAM: aminotransferase class IV; SPTR: Putative D-alanine aminotransferase; PFAM: Aminotransferase class IV.
       0.447
ADU48405.1
Hypothetical protein; InterPro IPR013434; KEGG: kfl:Kfla_3574 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Putative transmembrane protein (PGPGW); TIGRFAM: conserved hypothetical protein TIGR02611.
       0.430
ADU48407.1
Chorismate binding protein; COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR019999: IPR015890; KEGG: sco:SCO1547 anthranilate synthase; PFAM: Chorismate binding-like; SPTR: Aminodeoxychorismate synthase; PFAM: chorismate binding enzyme.
       0.430
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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