STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48415.1KEGG: kra:Krad_1592 secreted protein; SPTR: Secreted protein. (437 aa)    
Predicted Functional Partners:
ADU47871.1
KEGG: kse:Ksed_08960 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.750
ADU48416.1
methionine-R-sulfoxide reductase; COGs: COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; InterPro IPR002579; KEGG: kfl:Kfla_3725 methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B; PRIAM: Peptide-methionine (R)-S-oxide reductase; SPTR: Methionine-R-sulfoxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase; Belongs to the MsrB Met sulfoxide reductase family.
       0.636
ADU48243.1
KEGG: kse:Ksed_13550 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.595
ADU48463.1
KEGG: kra:Krad_3212 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3040).
  
     0.575
ADU47517.1
KEGG: kse:Ksed_07270 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.567
ADU48903.1
Hypothetical protein; InterPro IPR010916; KEGG: kse:Ksed_09580 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.566
ADU48472.1
KEGG: kra:Krad_3230 hypothetical protein; SPTR: Putative transcriptional regulatory protein; TIGRFAM: DNA binding domain, excisionase family.
  
     0.553
ADU48831.1
KEGG: kse:Ksed_10780 hypothetical protein; SPTR: Secreted protein; PFAM: Protein of unknown function (DUF3515).
  
     0.540
ADU48231.1
COGs: COG3346 conserved hypothetical protein; InterPro IPR002994; KEGG: kse:Ksed_13470 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: SURF1 family.
  
     0.526
ADU47848.1
KEGG: kra:Krad_3756 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3618).
  
     0.524
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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