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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48428.1COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002347: IPR002198: IPR011294: IPR020904; KEGG: kfl:Kfla_5322 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; SPTR: 3-hydroxybutyrate dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short chain dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase. (277 aa)    
Predicted Functional Partners:
ADU47792.1
COGs: COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase alpha subunit; InterPro IPR012792: IPR004163: IPR004165; KEGG: nca:Noca_0330 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; PRIAM: 3-oxoacid CoA-transferase; SPTR: Putative 3-oxoadipate CoA-transferase subunit A; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit.
 
 
 0.919
ADU47791.1
COGs: COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase beta subunit; InterPro IPR012791: IPR004164: IPR004165; KEGG: nca:Noca_0331 butyryl-CoA:acetate CoA transferase; PFAM: coenzyme A transferase; PRIAM: 3-oxoacid CoA-transferase; SPTR: Butyryl-CoA:acetate CoA transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit.
  
 0.911
ADU47278.1
hydroxymethylglutaryl-CoA lyase; COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891; KEGG: kse:Ksed_21580 hydroxymethylglutaryl-CoA lyase; PFAM: pyruvate carboxyltransferase; SPTR: Putative hydroxymethylglutaryl-CoA lyase; PFAM: HMGL-like.
   
 
  0.901
ADU48339.1
hydroxymethylglutaryl-CoA lyase; COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891; KEGG: fre:Franean1_3719 pyruvate carboxyltransferase; PFAM: pyruvate carboxyltransferase; SPTR: Pyruvate carboxyltransferase; PFAM: HMGL-like.
   
 
  0.901
ADU48429.1
Putative transcriptional regulator, PucR family; COGs: COG2508 Regulator of polyketide synthase expression; InterPro IPR003018; KEGG: kfl:Kfla_5320 putative phytochrome sensor protein; PFAM: GAF domain protein; SMART: GAF domain protein; SPTR: GAF domain protein; PFAM: GAF domain.
 
     0.843
ADU48430.1
InterPro IPR000073; KEGG: gob:Gobs_4995 alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase superfamily protein-like; PFAM: alpha/beta hydrolase fold.
  
   0.579
ADU46765.1
KEGG: sro:Sros_0019 hypothetical protein; SPTR: Putative uncharacterized protein.
   
 
 0.552
ADU48427.1
COGs: COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; InterPro IPR001387: IPR001986; KEGG: scb:SCAB_21131 putative UDP-N-acetylglucosamine transferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Putative UDP-N-acetylglucosamine transferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); Helix-turn-helix; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase.
     
 0.528
ADU48576.1
3-oxoacyl-(acyl-carrier-protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
 0.504
ADU48426.1
COGs: COG0702 nucleoside-diphosphate-sugar epimerase; KEGG: rha:RHA1_ro08384 nucleoside diphosphate sugar epimerase; SPTR: Possible nucleoside diphosphate sugar epimerase; PFAM: NmrA-like family.
  
 
 0.497
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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