STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48437.1KEGG: kse:Ksed_15730 hypothetical protein; SPTR: Putative uncharacterized protein. (134 aa)    
Predicted Functional Partners:
ADU48466.1
COGs: COG0587 DNA polymerase III alpha subunit; InterProIPR004013: IPR011708: IPR004365: IPR003141: IPR 004805; KEGG: kra:Krad_3215 DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; PRIAM: DNA-directed DNA polymerase; SMART: phosphoesterase PHP domain protein; SPTR: Putative DNA polymerase III alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (pol [...]
  
     0.762
ADU48468.1
KEGG: kra:Krad_3217 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.669
dxs
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.
       0.578
ADU48438.1
Aconitase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
       0.541
ADU48356.1
KEGG: cfl:Cfla_0488 hypothetical protein; SPTR: Possible conserved transmembrane protein.
  
     0.478
ADU48430.1
InterPro IPR000073; KEGG: gob:Gobs_4995 alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase superfamily protein-like; PFAM: alpha/beta hydrolase fold.
 
     0.469
ADU48405.1
Hypothetical protein; InterPro IPR013434; KEGG: kfl:Kfla_3574 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Putative transmembrane protein (PGPGW); TIGRFAM: conserved hypothetical protein TIGR02611.
  
     0.449
ADU48118.1
Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain; COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase; InterPro IPR017927: IPR006058: IPR019480; KEGG: ace:Acel_1297 dihydroorotate oxidase B, electron transfer subunit; PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; SPTR: Dihydroorotate dehydrogenase electron transfer subunit; PFAM: Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B.
  
     0.445
ADU49354.1
NUDIX hydrolase; InterPro IPR000086; KEGG: kse:Ksed_21710 hypothetical protein; PFAM: NUDIX hydrolase; SPTR: Putative uncharacterized protein; PFAM: NUDIX domain.
  
     0.441
ADU48152.1
KEGG: kfl:Kfla_3064 hypothetical protein; SPTR: Anthranilate synthase component I.
  
     0.434
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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