STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48447.1KEGG: bcv:Bcav_1935 hypothetical protein; SPTR: Putative uncharacterized protein. (99 aa)    
Predicted Functional Partners:
ADU48445.1
KEGG: kra:Krad_1558 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3710).
 
     0.848
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
       0.837
rbpA-2
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.
  
     0.773
ADU48328.1
Regulatory protein MerR; InterPro IPR000551; KEGG: aau:AAur_1684 hypothetical protein; SMART: regulatory protein MerR; SPTR: Putative uncharacterized protein.
  
     0.768
whiA
Protein of unknown function DUF199; Involved in cell division and chromosome segregation.
  
     0.754
ADU48537.1
KEGG: kra:Krad_3289 integral membrane protein; SPTR: Integral membrane protein.
  
     0.754
ADU47209.1
Phosphoglycerate mutase; COGs: COG0406 Fructose-2 6-bisphosphatase; InterPro IPR013078; KEGG: tpr:Tpau_0688 phosphoglycerate mutase; PFAM: Phosphoglycerate mutase; SPTR: Putative phosphoglycerate mutase; PFAM: Phosphoglycerate mutase family.
  
     0.738
ADU48422.1
KEGG: bcv:Bcav_1965 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3000).
  
     0.736
ADU48361.1
InterPro IPR007139; KEGG: kra:Krad_3046 protein of unknown function DUF349; PFAM: protein of unknown function DUF349; SPTR: Putative uncharacterized protein; manually curated; PFAM: Domain of Unknown Function (DUF349).
  
     0.732
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.730
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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