STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48452.1KEGG: kra:Krad_1551 DNA-binding protein; SPTR: Putative DNA-binding protein; PFAM: Protein of unknown function (DUF3071). (495 aa)    
Predicted Functional Partners:
ADU48284.1
Hypothetical protein; KEGG: cai:Caci_1250 putative cellulose-binding protein; SPTR: Putative cellulose-binding protein.
 
     0.727
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
 
     0.695
ADU49062.1
COGs: COG3173 aminoglycoside phosphotransferase; InterPro IPR002575; KEGG: kra:Krad_1175 aminoglycoside phosphotransferase; PFAM: aminoglycoside phosphotransferase; SPTR: Macrolide 2'-phosphotransferase; PFAM: Phosphotransferase enzyme family.
  
     0.685
ADU49053.1
KEGG: cms:CMS_1890 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.675
ADU48487.1
KEGG: kfl:Kfla_2801 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.667
ADU48203.1
COGs: COG3429 Glucose-6-P dehydrogenase subunit; InterPro IPR019297; KEGG: kra:Krad_2925 OpcA protein; PFAM: Glucose-6-phosphate dehydrogenase subunit; SPTR: OpcA protein; PFAM: Glucose-6-phosphate dehydrogenase subunit; TIGRFAM: opcA protein.
  
     0.654
ADU48451.1
Uncharacterized protein family UPF0126; COGs: COG2860 membrane protein; InterPro IPR005115; KEGG: kse:Ksed_15830 predicted membrane protein; PFAM: Uncharacterised protein family UPF0126; SPTR: Predicted membrane protein; PFAM: UPF0126 domain.
       0.627
ADU47587.1
KEGG: bcv:Bcav_3015 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.608
ADU47942.1
ComEC/Rec2-related protein; COGs: COG2333 hydrolase (metallo-beta-lactamase superfamily); InterPro IPR004477; KEGG: kra:Krad_3434 DNA internalization-related competence protein ComEC/Rec2; PFAM: ComEC/Rec2-related protein; SPTR: Putative integral membrane protein; TIGRFAM: ComEC/Rec2-related protein; PFAM: Competence protein; Metallo-beta-lactamase superfamily; TIGRFAM: ComEC/Rec2-related protein; DNA internalization-related competence protein ComEC/Rec2.
 
  
 0.607
ADU47902.1
COGs: COG1530 Ribonuclease G and E; InterPro IPR004659: IPR017937: IPR019307: IPR003029; KEGG: sgr:SGR_4940 hypothetical protein; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; SPTR: Putative uncharacterized protein; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family.
  
  
 0.600
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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