STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48459.1Sucraseferredoxin family protein; COGs: COG4759 Uncharacterized protein containing thioredoxin-like domain; InterPro IPR009737; KEGG: sen:SACE_1358 hypothetical protein; PFAM: Sucraseferredoxin family protein; SPTR: Putative uncharacterized protein; PFAM: Sucrase/ferredoxin-like. (362 aa)    
Predicted Functional Partners:
ADU48458.1
COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR002205: IPR006691; KEGG: kfl:Kfla_3453 DNA topoisomerase (ATP-hydrolyzing); PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA gyrase/topoisomerase IV subunit A; SPTR: DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller.
       0.792
ADU48457.1
COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: gob:Gobs_3234 nitroreductase; PFAM: nitroreductase; SPTR: Nitroreductase; PFAM: Nitroreductase family.
       0.543
ADU49105.1
DivIVA domain; InterPro IPR019933; KEGG: kra:Krad_1145 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: DivIVA domain; TIGRFAM: DivIVA domain.
  
     0.478
ADU48517.1
KEGG: ace:Acel_0947 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.423
ADU48487.1
KEGG: kfl:Kfla_2801 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.411
ADU49194.1
KEGG: kra:Krad_1120 hypothetical protein; SPTR: Putative secreted protein.
  
     0.411
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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