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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48472.1KEGG: kra:Krad_3230 hypothetical protein; SPTR: Putative transcriptional regulatory protein; TIGRFAM: DNA binding domain, excisionase family. (144 aa)    
Predicted Functional Partners:
ADU48766.1
KEGG: cmi:CMM_1413 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.776
ADU48140.1
KEGG: cfl:Cfla_1864 protein of unknown function DUF2581; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2581).
  
     0.688
ADU48445.1
KEGG: kra:Krad_1558 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3710).
  
     0.661
ADU48258.1
KEGG: bfa:Bfae_16260 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.633
ADU48463.1
KEGG: kra:Krad_3212 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3040).
  
     0.629
ADU48538.1
RDD domain containing protein; InterPro IPR010432: IPR016795; KEGG: aau:AAur_1745 transRDD family protein; PFAM: RDD domain containing protein; SPTR: Putative transmembrane protein, RDD family domain; PFAM: RDD family.
  
     0.600
ADU48537.1
KEGG: kra:Krad_3289 integral membrane protein; SPTR: Integral membrane protein.
  
     0.596
ADU48474.1
COGs: COG0515 Serine/threonine protein kinase; InterProIPR017442: IPR005543: IPR020635: IPR002290: IPR 008271: IPR000719; KEGG: nca:Noca_3086 protein kinase; PFAM: Serine/threonine-protein kinase-like domain; PASTA domain containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; PASTA domain containing protein; SPTR: Serine/threonine kinase; PFAM: Protein kinase domain; PASTA domain.
     
 0.577
ADU48422.1
KEGG: bcv:Bcav_1965 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3000).
  
     0.572
ADU48415.1
KEGG: kra:Krad_1592 secreted protein; SPTR: Secreted protein.
  
     0.553
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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