STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48485.1Cyclase/dehydrase; InterPro IPR005031; KEGG: amd:AMED_2448 cyclase/dehydrase; PFAM: cyclase/dehydrase; SPTR: Putative uncharacterized protein; PFAM: Polyketide cyclase / dehydrase and lipid transport. (147 aa)    
Predicted Functional Partners:
ADU48482.1
Endonuclease/exonuclease/phosphatase; COGs: COG3568 Metal-dependent hydrolase; InterPro IPR005135; KEGG: tfu:Tfu_1034 hypothetical protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Putative uncharacterized protein; PFAM: Endonuclease/Exonuclease/phosphatase family.
       0.820
ADU48484.1
KEGG: gob:Gobs_3327 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.820
ADU48483.1
Glucokinase; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600: IPR004654; KEGG: sco:SCO6260 sugar kinase; PFAM: ROK family protein; SPTR: Putative sugar kinase; TIGRFAM: glucokinase, ROK family; PFAM: ROK family; TIGRFAM: ROK family protein (putative glucokinase).
       0.801
ADU49054.1
ABC-1 domain-containing protein; COGs: COG0661 unusual protein kinase; InterPro IPR000719: IPR004147: IPR002575; KEGG: kfl:Kfla_5331 ABC-1 domain protein; PFAM: ABC-1 domain-containing protein; aminoglycoside phosphotransferase; SPTR: Putative ABC transporter ATP-binding protein; PFAM: ABC1 family.
  
 
 
 0.786
ADU47196.1
COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: fre:Franean1_6136 phospholipid/glycerol acyltransferase; PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; SPTR: Putative uncharacterized protein; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases.
  
     0.754
ADU49436.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: tcu:Tcur_0663 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Putative DNA-binding protein; PFAM: Helix-turn-helix.
  
   
 0.744
ADU47019.1
Arsenite efflux ATP-binding protein ArsA; COGs: COG0003 ATPase involved in chromosome partitioning; KEGG: kfl:Kfla_0448 anion-transporting ATPase; SPTR: Putative uncharacterized protein; PFAM: Anion-transporting ATPase; TC 3.A.4.1.1.
 
    0.691
ADU47195.1
NAD-dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: nca:Noca_0486 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Putative epimerase; PFAM: NAD dependent epimerase/dehydratase family.
  
     0.679
ADU49428.1
Protein of unknown function DUF2596; InterPro IPR019706; KEGG: sgr:SGR_3994 hypothetical protein; PFAM: Protein of unknown function DUF2596; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2596).
  
     0.662
ADU47018.1
Arsenite efflux ATP-binding protein ArsA; COGs: COG0003 ATPase involved in chromosome partitioning; KEGG: tbi:Tbis_0197 anion-transporting ATPase; SPTR: Putative ion-transporting ATPase; PFAM: Anion-transporting ATPase; TC 3.A.4.1.1.
 
    0.658
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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