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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48487.1KEGG: kfl:Kfla_2801 hypothetical protein; SPTR: Putative uncharacterized protein. (442 aa)    
Predicted Functional Partners:
ADU48488.1
KEGG: fre:Franean1_1818 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.773
ADU48284.1
Hypothetical protein; KEGG: cai:Caci_1250 putative cellulose-binding protein; SPTR: Putative cellulose-binding protein.
  
    0.750
ADU48468.1
KEGG: kra:Krad_3217 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.699
ADU48452.1
KEGG: kra:Krad_1551 DNA-binding protein; SPTR: Putative DNA-binding protein; PFAM: Protein of unknown function (DUF3071).
 
     0.667
ADU48479.1
COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594; KEGG: cai:Caci_6058 putative signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SPTR: Putative signal transduction histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
     0.643
ADU49053.1
KEGG: cms:CMS_1890 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
   0.630
ADU49559.1
Peptidase M12A astacin; InterPro IPR006026: IPR001506: IPR007280; KEGG: lch:Lcho_4313 peptidase domain-containing protein; PFAM: peptidase M12A astacin; peptidase domain protein; SMART: peptidase metallopeptidase; SPTR: Peptidase domain protein; PFAM: Astacin (Peptidase family M12A).
 
   
 0.622
ADU48489.1
DNA polymerase III, epsilon subunit; COGs: COG0322 Nuclease subunit of the excinuclease complex; InterPro IPR013520: IPR000305: IPR006055: IPR006054; KEGG: kra:Krad_3247 hypothetical protein; PFAM: Exonuclease RNase T and DNA polymerase III; Excinuclease ABC C subunit domain protein; PRIAM: DNA-directed DNA polymerase; SMART: Exonuclease; Excinuclease ABC C subunit domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease; GIY-YIG catalytic domain; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family.
       0.612
ADU48490.1
InterPro IPR019887; KEGG: bcv:Bcav_1895 transcriptional regulator, AsnC family; PFAM: Transcription regulator AsnC-type-like; SPTR: Putative transcriptional regulator; PFAM: AsnC family.
       0.572
ADU48151.1
InterPro IPR019051; KEGG: bcv:Bcav_2226 hypothetical protein; PFAM: Trp biosynthesis associated, transmembrane protein, Oprn/Chp; SPTR: Putative uncharacterized protein; PFAM: Tryptophan-associated transmembrane protein (Trp_oprn_chp).
  
     0.560
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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