STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48488.1KEGG: fre:Franean1_1818 hypothetical protein; SPTR: Putative uncharacterized protein. (83 aa)    
Predicted Functional Partners:
ADU48487.1
KEGG: kfl:Kfla_2801 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.773
ADU48243.1
KEGG: kse:Ksed_13550 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.758
ADU47952.1
Peptidoglycan-binding lysin domain; InterPro IPR018392; KEGG: kse:Ksed_17220 LysM domain-containing protein; PFAM: Peptidoglycan-binding lysin domain; SPTR: Putative uncharacterized protein; PFAM: LysM domain.
  
     0.732
ADU48489.1
DNA polymerase III, epsilon subunit; COGs: COG0322 Nuclease subunit of the excinuclease complex; InterPro IPR013520: IPR000305: IPR006055: IPR006054; KEGG: kra:Krad_3247 hypothetical protein; PFAM: Exonuclease RNase T and DNA polymerase III; Excinuclease ABC C subunit domain protein; PRIAM: DNA-directed DNA polymerase; SMART: Exonuclease; Excinuclease ABC C subunit domain protein; SPTR: Putative uncharacterized protein; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease; GIY-YIG catalytic domain; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family.
 
     0.731
ADU47020.1
KEGG: nca:Noca_0019 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.674
ADU49709.1
KEGG: nca:Noca_0019 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.608
ADU48903.1
Hypothetical protein; InterPro IPR010916; KEGG: kse:Ksed_09580 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.606
ADU48013.1
COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterPro IPR002298: IPR001098; KEGG: fal:FRAAL3779 putative DNA polymerase I; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase; SPTR: Putative DNA polymerase I; PFAM: DNA polymerase family A.
  
     0.596
ADU48490.1
InterPro IPR019887; KEGG: bcv:Bcav_1895 transcriptional regulator, AsnC family; PFAM: Transcription regulator AsnC-type-like; SPTR: Putative transcriptional regulator; PFAM: AsnC family.
       0.582
ADU48987.1
KEGG: sco:SCO5242 integral membrane protein; SPTR: Putative integral membrane protein.
  
     0.582
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.