STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48518.1KEGG: kfl:Kfla_2711 hypothetical protein; SPTR: Putative uncharacterized protein. (246 aa)    
Predicted Functional Partners:
ADU48519.1
Cobalt transport protein; InterPro IPR003339; KEGG: sco:SCO2323 integral membrane protein; PFAM: cobalt transport protein; SPTR: Cobalt transport protein; PFAM: Cobalt transport protein.
 
     0.939
ADU48521.1
Hypothetical protein; InterPro IPR017196; KEGG: stp:Strop_4401 hypothetical protein; SPTR: Integral membrane protein; PFAM: Protein of unknown function (DUF1393).
 
     0.932
ADU48520.1
ABC transporter related protein; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439: IPR003593: IPR017871; KEGG: kfl:Kfla_2709 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter.
 
     0.910
ADU48522.1
COGs: COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase; InterPro IPR003203; KEGG: amd:AMED_7046 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase; PFAM: cobalbumin biosynthesis protein; SPTR: Adenosylcobinamide kinase; PFAM: Cobinamide kinase / cobinamide phosphate guanyltransferase.
       0.808
cobS
Cobalamin-5-phosphate synthase CobS; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
       0.804
ADU48517.1
KEGG: ace:Acel_0947 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.704
ADU48225.1
Alanine racemase domain protein; InterPro IPR000408: IPR001608; KEGG: nca:Noca_4674 alanine racemase domain-containing protein; PFAM: alanine racemase domain protein; SPTR: Alanine racemase domain protein; PFAM: Alanine racemase, N-terminal domain.
  
     0.597
ADU48096.1
Extracellular solute-binding protein family 5; COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: kse:Ksed_12470 ABC-type dipeptide transport system, periplasmic component; PFAM: extracellular solute-binding protein family 5; SPTR: ABC-type dipeptide transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.
  
     0.531
ADU48722.1
InterPro IPR000182; KEGG: cfl:Cfla_2792 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; PFAM: Acetyltransferase (GNAT) family.
  
     0.509
ADU48516.1
COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: kfl:Kfla_6857 beta-lactamase; PFAM: beta-lactamase; SPTR: Beta-lactamase; PFAM: Beta-lactamase.
 
     0.499
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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