STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48553.1COGs: COG3573 oxidoreductase; InterPro IPR003953: IPR014614; KEGG: rce:RC1_0236 hypothetical protein; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: Putative uncharacterized protein; PFAM: FAD binding domain. (528 aa)    
Predicted Functional Partners:
ADU48554.1
COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterPro IPR012001: IPR011766; KEGG: maq:Maqu_2345 hypothetical protein; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; SPTR: Thiamine pyrophosphate protein domain protein TPP-binding; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain.
       0.683
ADU49647.1
COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR003953; KEGG: nca:Noca_0203 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; SPTR: Fumarate reductase/succinate dehydrogenase flavoprotein domain protein; PFAM: FAD binding domain; TIGRFAM: flavocytochrome c.
  
     0.440
ADU48551.1
COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: kra:Krad_4081 putative Zn-dependent hydrolase; SPTR: Putative uncharacterized protein; PFAM: Metallo-beta-lactamase superfamily.
       0.434
ADU48552.1
Major facilitator superfamily MFS_1; COGs: COG2814 Arabinose efflux permease; InterPro IPR001958: IPR011701: IPR005829: IPR000740; KEGG: kse:Ksed_04650 arabinose efflux permease family protein; PFAM: major facilitator superfamily MFS_1; SPTR: Putative multidrug resistance protein; PFAM: Sugar (and other) transporter; Major Facilitator Superfamily.
       0.434
ADU48549.1
KEGG: xce:Xcel_0944 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.400
ADU48550.1
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: cfl:Cfla_0974 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter.
       0.400
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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