Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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ADU48577.1Protein of unknown function UPF0027; COGs: COG1690 conserved hypothetical protein; InterPro IPR001233; KEGG: pfr:PFREUD_23600 hypothetical protein; PFAM: protein of unknown function UPF0027; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein family UPF0027. (402 aa)    
Predicted Functional Partners:
ADU48579.1
HNH endonuclease; COGs: COG1403 Restriction endonuclease; InterPro IPR002711: IPR003615; KEGG: kfl:Kfla_6715 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: HNH endonuclease; PFAM: HNH endonuclease.
 
   
 0.599
ADU47200.1
KEGG: kra:Krad_0034 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.507
ADU48223.1
KEGG: kfl:Kfla_3285 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.507
ADU48578.1
Transcription factor WhiB; InterPro IPR003482; KEGG: cai:Caci_7795 transcription factor WhiB; PFAM: transcription factor WhiB; SPTR: Transcription factor WhiB; PFAM: Transcription factor WhiB.
       0.498
ADU50044.1
InterPro IPR008912; KEGG: aau:AAur_2027 VWA domain CoxE-like family protein; PFAM: VWA containing CoxE family protein; SPTR: VWA domain containing CoxE-like protein family; PFAM: VWA domain containing CoxE-like protein.
  
     0.467
ADU46785.1
DEAD/DEAH box helicase domain protein; COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR011545: IPR001650: IPR014001: IPR014021: IPR 014014; KEGG: nca:Noca_4567 DEAD/DEAH box helicase domain-containing protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: ATP-dependent RNA helicase; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase.
   
 0.460
deaD
ATP-dependent RNA helicase CsdA; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.
   
 0.460
ADU47823.1
DEAD/DEAH box helicase domain protein; COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR011545: IPR001650: IPR014001: IPR014021: IPR 014014; KEGG: kse:Ksed_10490 DNA/RNA helicase, superfamily II; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: ATP-dependent RNA helicase; manually curated; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase.
   
 0.460
ADU49071.1
DEAD/DEAH box helicase domain protein; COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR014021: IPR001650: IPR014014: IPR014001: IPR 011545: IPR000629; KEGG: ske:Sked_27750 DNA/RNA helicase, superfamily II; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: Putative ATP-dependent RNA helicase; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; Belongs to the DEAD box helicase family.
   
 0.460
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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