STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48583.1Major facilitator superfamily MFS_1; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701: IPR005829; KEGG: mva:Mvan_5862 major facilitator superfamily transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily MFS_1; PFAM: Major Facilitator Superfamily. (444 aa)    
Predicted Functional Partners:
ADU48582.1
Transcriptional regulator, ArsR family; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001845: IPR001763; KEGG: rha:RHA1_ro11220 ArsR family transcriptional regulator; PFAM: regulatory protein ArsR; Rhodanese domain protein; SMART: regulatory protein ArsR; Rhodanese domain protein; SPTR: Possible transcriptional regulator, ArsR family; PFAM: Bacterial regulatory protein, arsR family; Rhodanese-like domain.
 
  
 0.948
ADU47584.1
Transcriptional regulator, ArsR family; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001845: IPR001763: IPR001307; KEGG: sen:SACE_4409 ArsR family transcriptional regulator; PFAM: Rhodanese domain protein; regulatory protein ArsR; SMART: Rhodanese domain protein; regulatory protein ArsR; SPTR: Possible transcriptional regulatory protein (Possibly ArsR-family); PFAM: Bacterial regulatory protein, arsR family; Rhodanese-like domain.
 
  
 0.787
ADU48581.1
Rieske (2Fe-2S) iron-sulfur domain; COGs: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase; InterPro IPR017941; KEGG: mlu:Mlut_20070 nitrite reductase (NAD(P)H), small subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Rieske (2Fe-2S) domain protein; PFAM: Rieske [2Fe-2S] domain.
       0.550
ADU49828.1
KEGG: nml:Namu_3002 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.455
ADU49970.1
KEGG: rha:RHA1_ro07227 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.451
ADU49438.1
3-keto-5-aminohexanoate cleavage enzyme; COGs: COG3246 conserved hypothetical protein; InterPro IPR008567; KEGG: kfl:Kfla_0987 protein of unknown function DUF849; PFAM: protein of unknown function DUF849; SPTR: Putative uncharacterized protein; PFAM: Prokaryotic protein of unknown function (DUF849).
   
    0.408
ADU46895.1
KEGG: fre:Franean1_3436 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.407
ADU46898.1
KEGG: fre:Franean1_3436 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.407
ADU48811.1
KEGG: fre:Franean1_3436 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.407
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.