STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48596.1Tail Collar domain protein; COGs: COG4675 Microcystin-dependent protein; InterPro IPR011083; KEGG: mlo:mll4443 microcystin dependent protein MdpB; PFAM: Tail Collar domain protein; SPTR: Tail Collar domain protein; PFAM: Phage Tail Collar Domain. (168 aa)    
Predicted Functional Partners:
ADU48599.1
GCN5-related N-acetyltransferase; InterPro IPR000182; KEGG: mxa:MXAN_0328 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase, GNAT family; PFAM: Acetyltransferase (GNAT) family.
 
     0.937
ADU48597.1
Tail Collar domain protein; COGs: COG4675 Microcystin-dependent protein; InterPro IPR011083; KEGG: mlo:mll4442 microcystin dependent protein MdpB; PFAM: Tail Collar domain protein; SPTR: Microcystin dependent protein; MdpB; PFAM: Phage Tail Collar Domain.
 
    
0.821
ADU48598.1
Tail Collar domain protein; COGs: COG4675 Microcystin-dependent protein; InterPro IPR011083; KEGG: mlo:mll4441 microcystin dependent protein MdpB; PFAM: Tail Collar domain protein; SPTR: Microcystin dependent protein; MdpB; PFAM: Phage Tail Collar Domain.
 
    
0.792
ADU48595.1
Cadherin; InterPro IPR002126: IPR006626; KEGG: mlo:mll4444 hypothetical protein; PFAM: Cadherin; SMART: Cadherin; Parallel beta-helix repeat; SPTR: Mll4444 protein.
 
     0.788
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.