STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48606.1Extracellular solute-binding protein family 1; COGs: COG1653 ABC-type sugar transport system periplasmic component; InterPro IPR006059: IPR017909; KEGG: rop:ROP_25030 putative ABC transporter substrate-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Putative ABC transporter substrate-binding protein; PFAM: Bacterial extracellular solute-binding protein. (454 aa)    
Predicted Functional Partners:
ADU48604.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family; COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: mjl:Mjls_4735 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.997
ADU48605.1
COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: nda:Ndas_4000 binding-protein-dependent transport systems inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 0.994
ADU49411.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR003593: IPR003439: IPR005116: IPR017871; KEGG: ach:Achl_0867 ABC transporter related; PFAM: ABC transporter related; TOBE domain-containing protein; SMART: AAA ATPase; SPTR: ABC transporter ATP-binding protein; PFAM: ABC transporter; TOBE domain.
  
 0.965
ADU46891.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family; COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: sma:SAV_1396 ABC transporter permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Putative multiple sugar ABC transporter permease protein; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.943
ADU48602.1
COGs: COG0246 Mannitol-1-phosphate/altronate dehydrogenase; InterPro IPR000669: IPR013131: IPR013118; KEGG: kfl:Kfla_1360 mannitol dehydrogenase domain protein; PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; SPTR: Mannitol dehydrogenase domain protein; PFAM: Mannitol dehydrogenase C-terminal domain; Mannitol dehydrogenase Rossmann domain.
 
    0.849
xylB
Xylulokinase; COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterProIPR018484: IPR018485: IPR006000: IPR019825: IPR 018483; KEGG: svi:Svir_04580 D-xylulose kinase; PFAM: Carbohydrate kinase, FGGY-like; SPTR: Xylulokinase; TIGRFAM: xylulokinase; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: D-xylulose kinase.
 
     0.695
ADU48607.1
Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005: IPR018060: IPR018062; KEGG: ach:Achl_1710 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Transcriptional regulator, AraC family; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.
 
   
 0.693
ADU46893.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; COGs: COG3839 ABC-type sugar transport systems ATPase components; InterPro IPR003439: IPR013611: IPR003593; KEGG: sma:SAV_1398 sugar ABC transporter ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; SPTR: Putative multiple sugar ABC transporter ATP-binding protein; PFAM: ABC transporter; TOBE domain.
 
 
 0.647
ADU46638.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family; COGs: COG0395 ABC-type sugar transport system permease component; InterPro IPR000515; KEGG: pak:HMPREF0675_5028 ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport permease; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.629
ADU46637.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family; COGs: COG1175 ABC-type sugar transport systems permease components; InterPro IPR000515; KEGG: pac:PPA1965 binding-protein-dependent transport permease; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport permease; PFAM: Binding-protein-dependent transport system inner membrane component.
 
 
 0.624
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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