STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ADU48612.14Fe-4S ferredoxin iron-sulfur binding domain protein; COGs: COG0348 Polyferredoxin; InterPro IPR017900: IPR017896; KEGG: cfl:Cfla_3683 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein. (471 aa)    
Predicted Functional Partners:
ADU48613.1
KEGG: pin:Ping_1371 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADU49556.1
COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR017896: IPR011895: IPR002880: IPR019752: IPR 019456: IPR011766: IPR017900; KEGG: mmi:MMAR_3408 pyruvate ferredoxin/flavodoxin oxidoreductase family protein; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein; SPTR: Pyruvate ferredoxin/flavodoxin oxidoreductase family protein; TIGRFAM [...]
  
 
 0.598
ADU48611.1
KEGG: aau:AAur_pTC10136 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.595
ADU49321.1
Polysulphide reductase NrfD; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR017896: IPR005614: IPR017900; KEGG: nca:Noca_2933 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; PFAM: Polysulphide reductase NrfD; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; PFAM: 4Fe-4S binding domain; Polysulphide reductase, NrfD.
  
  
 0.539
ADU48614.1
COGs: COG0121 glutamine amidotransferase; InterPro IPR000583: IPR017932; KEGG: rha:RHA1_ro04807 hypothetical protein; PFAM: glutamine amidotransferase class-II; SPTR: Putative uncharacterized protein; PFAM: Glutamine amidotransferases class-II.
 
     0.529
ADU48382.1
NapC/NirT cytochrome c domain protein; InterPro IPR005126: IPR011031; KEGG: gem:GM21_1063 hypothetical protein; PFAM: NapC/NirT cytochrome c domain protein; SPTR: Putative uncharacterized protein; PFAM: NapC/NirT cytochrome c family, N-terminal region.
 
 
 0.490
ADU46853.1
Nitric oxide reductase, NorZ apoprotein; COGs: COG3256 Nitric oxide reductase large subunit; InterPro IPR000883; KEGG: mjl:Mjls_1539 nitric-oxide reductase subunit B; PFAM: cytochrome c oxidase subunit I; SPTR: Nitric oxide reductase; PFAM: Cytochrome C and Quinol oxidase polypeptide I.
 
  
 0.467
ADU48494.1
Menaquinol-cytochrome c reductase cytochrome c1 subunit precursor; InterPro IPR003088: IPR009152: IPR009056; KEGG: kse:Ksed_16190 cytochrome c, mono- and diheme variants family; PFAM: cytochrome c class I; SPTR: Cytochrome C heme-binding subunit; PFAM: Cytochrome c.
  
  
 0.442
ADU48380.1
COGs: COG3005 Nitrate/TMAO reductase membrane-bound tetraheme cytochrome c subunit; InterPro IPR017571: IPR011031; KEGG: ahe:Arch_1475 cytochrome c nitrate reductase, small subunit; SPTR: Cytochrome c nitrate reductase, small subunit; TIGRFAM: cytochrome c nitrate reductase, small subunit; PFAM: NapC/NirT cytochrome c family, N-terminal region; TIGRFAM: cytochrome c nitrate reductase, small subunit.
  
 
 0.410
ADU49320.1
Nitrate reductase; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006963: IPR006656: IPR006657; KEGG: nca:Noca_2934 formate dehydrogenase; PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; molybdopterin oxidoreductase; PRIAM: Nitrate reductase; SPTR: Formate dehydrogenase; manually curated; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.408
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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