STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48616.1NnrS family protein; COGs: COG3213 Uncharacterized protein involved in response to NO; InterPro IPR010266; KEGG: pde:Pden_4044 NnrS family protein; PFAM: NnrS family protein; SPTR: NnrS family protein; PFAM: NnrS protein. (380 aa)    
Predicted Functional Partners:
ADU48615.1
ABC transporter related protein; COGs: COG0178 Excinuclease ATPase subunit; InterPro IPR003439; KEGG: rha:RHA1_ro03835 UvrABC system protein A; PFAM: ABC transporter related; SPTR: UvrABC system protein A; PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit.
       0.773
ADU48614.1
COGs: COG0121 glutamine amidotransferase; InterPro IPR000583: IPR017932; KEGG: rha:RHA1_ro04807 hypothetical protein; PFAM: glutamine amidotransferase class-II; SPTR: Putative uncharacterized protein; PFAM: Glutamine amidotransferases class-II.
       0.542
ADU48617.1
Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: ach:Achl_0696 peptidase M23; PFAM: Peptidase M23; SPTR: Peptidase M23; PFAM: Peptidase family M23.
  
    0.440
ADU46935.1
COGs: COG5013 Nitrate reductase alpha subunit; InterPro IPR006656: IPR006657: IPR006655: IPR006468; KEGG: nca:Noca_1346 respiratory nitrate reductase alpha subunit apoprotein; PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; PRIAM: Nitrate reductase; SPTR: Respiratory nitrate reductase alpha subunit apoprotein; TIGRFAM: nitrate reductase, alpha subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: respiratory nitrate reductase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
   
 0.428
ADU46934.1
COGs: COG1140 Nitrate reductase beta subunit; InterPro IPR017896: IPR006547; KEGG: kfl:Kfla_4151 nitrate reductase, beta subunit; SPTR: Nitrate reductase, beta subunit; TIGRFAM: nitrate reductase, beta subunit; TIGRFAM: nitrate reductase, beta subunit.
 
     0.417
ADU46853.1
Nitric oxide reductase, NorZ apoprotein; COGs: COG3256 Nitric oxide reductase large subunit; InterPro IPR000883; KEGG: mjl:Mjls_1539 nitric-oxide reductase subunit B; PFAM: cytochrome c oxidase subunit I; SPTR: Nitric oxide reductase; PFAM: Cytochrome C and Quinol oxidase polypeptide I.
  
  
 0.400
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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