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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48622.1KEGG: ske:Sked_14030 hypothetical protein; SPTR: DNA primase. (172 aa)    
Predicted Functional Partners:
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
     
 0.812
ADU47517.1
KEGG: kse:Ksed_07270 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.752
ADU48624.1
COGs: COG0232 dGTP triphosphohydrolase; InterPro IPR006674: IPR003607: IPR006261; KEGG: kse:Ksed_11910 deoxyguanosinetriphosphate triphosphohydrolase, putative; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; SPTR: Deoxyguanosinetriphosphate triphosphohydrolase-like protein; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative; uncharacterized domain HDIG; Belongs to the dGTPase family. Type 2 subfamily.
       0.746
ADU50107.1
KEGG: cfl:Cfla_3716 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.737
ADU50106.1
KEGG: ske:Sked_37910 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.734
ADU47422.1
KEGG: kse:Ksed_23860 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.699
ADU49019.1
Protein of unknown function DUF343; InterPro IPR005651; KEGG: ske:Sked_09130 hypothetical protein; PFAM: protein of unknown function DUF343; SPTR: Putative uncharacterized protein; PFAM: Trm112p-like protein.
  
     0.695
ADU48903.1
Hypothetical protein; InterPro IPR010916; KEGG: kse:Ksed_09580 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.674
ADU46906.1
Hypothetical protein; KEGG: cre:CHLREDRAFT_6783 SNF2 superfamily protein; SPTR: Putative uncharacterized protein.
  
  
 0.615
ADU47149.1
KEGG: ske:Sked_32050 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3180).
  
     0.614
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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