STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48658.1Domain of unknown function DUF1801; InterPro IPR014922; KEGG: scb:SCAB_7521 hypothetical protein; PFAM: Domain of unknown function DUF1801; SPTR: Conserved hypthetical protein; PFAM: Domain of unknown function (DU1801). (156 aa)    
Predicted Functional Partners:
ADU48659.1
COGs: COG2365 Protein tyrosine/serine phosphatase; InterPro IPR016130: IPR000387; KEGG: tcu:Tcur_2401 protein tyrosine/serine phosphatase; SPTR: Protein tyrosine/serine phosphatase-like protein.
       0.516
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.