STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48663.1Binding-protein-dependent transport systems inner membrane component; COGs: COG1178 ABC-type Fe3+ transport system permease component; InterPro IPR000515; KEGG: sro:Sros_8129 iron ABC transporter, permease protein; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Iron ABC transporter, permease protein; manually curated; PFAM: Binding-protein-dependent transport system inner membrane component. (518 aa)    
Predicted Functional Partners:
ADU48664.1
Extracellular solute-binding protein family 1; COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; InterPro IPR006059; KEGG: mgi:Mflv_3363 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Extracellular solute-binding protein, family 1; PFAM: Bacterial extracellular solute-binding protein.
 
 
 0.996
ADU48662.1
ABC transporter related protein; COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439: IPR013611: IPR003593: IPR017871; KEGG: sro:Sros_8128 ABC Fe+3 transporter, ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; SPTR: ABC Fe+3 transporter, ATPase subunit; PFAM: ABC transporter; TOBE domain.
 
 0.993
ADU47109.1
KEGG: cfl:Cfla_0472 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Anti-sigma-K factor rskA.
  
  
 0.791
ADU48761.1
COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterProIPR005893: IPR003593: IPR017871: IPR003439: IPR 013611; KEGG: nca:Noca_3228 spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; Transport-associated OB domain-containing protein; SMART: AAA ATPase; SPTR: Spermidine/putrescine ABC transporter ATPase subunit; TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter; TOBE domain; TIGRFAM: spermidine/putrescine ABC transporter ATP-binding subunit.
  
 0.598
ADU49305.1
Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: tfu:Tfu_2810 hypothetical protein; PFAM: periplasmic binding protein; SPTR: Putative uncharacterized protein; manually curated.
  
  
 0.573
ADU49375.1
ABC transporter related protein; COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003593: IPR003439: IPR005116: IPR017871; KEGG: sma:SAV_1721 ABC transporter ATP-binding protein; PFAM: ABC transporter related; TOBE domain-containing protein; SMART: AAA ATPase; SPTR: Putative ABC transporter ATP-binding protein; PFAM: ABC transporter; TOBE domain.
  
 0.573
ADU48665.1
KEGG: xce:Xcel_2206 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: PemK-like protein.
       0.433
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.