STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48686.1COGs: COG2355 Zn-dependent dipeptidase microsomal dipeptidase homolog; InterPro IPR008257; KEGG: gob:Gobs_2447 membrane dipeptidase; PFAM: peptidase M19 renal dipeptidase; PRIAM: Membrane dipeptidase; SPTR: Putative dipeptidase; PFAM: Membrane dipeptidase (Peptidase family M19). (397 aa)    
Predicted Functional Partners:
ADU48855.1
Peptidase C26; COGs: COG2071 glutamine amidotransferase; InterPro IPR017926: IPR011697; KEGG: ace:Acel_1848 peptidase C26; PFAM: peptidase C26; SPTR: Putative uncharacterized protein; PFAM: Peptidase C26.
      0.903
rimO
SSU ribosomal protein S12P methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
       0.614
ADU48683.1
Competence/damage-inducible protein cinA; COGs: COG1546 Uncharacterized protein (competence- and mitomycin-induced); InterPro IPR008136; KEGG: sgr:SGR_1767 putative competence-damage inducible protein; PFAM: CinA domain protein; SPTR: Competence-damage inducible protein; PFAM: Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA C-terminal domain; Belongs to the CinA family.
       0.612
ADU48684.1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; COGs: COG0558 Phosphatidylglycerophosphate synthase; InterPro IPR004570: IPR000462; KEGG: gob:Gobs_3938 CDP-diacylglycerol/glycerol-3-phosphate3-phosphatidyl transferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: Putative phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.605
ADU49556.1
COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR017896: IPR011895: IPR002880: IPR019752: IPR 019456: IPR011766: IPR017900; KEGG: mmi:MMAR_3408 pyruvate ferredoxin/flavodoxin oxidoreductase family protein; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein; SPTR: Pyruvate ferredoxin/flavodoxin oxidoreductase family protein; TIGRFAM [...]
     
 0.595
ADU47102.1
COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: kra:Krad_3287 beta-lactamase; PFAM: beta-lactamase; SPTR: Putative beta-lactamase; PFAM: Beta-lactamase.
 
    0.503
ADU48682.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: kra:Krad_1487 helix-turn-helix domain protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Helix-turn-helix domain protein; PFAM: Helix-turn-helix.
  
    0.493
ADU48516.1
COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: kfl:Kfla_6857 beta-lactamase; PFAM: beta-lactamase; SPTR: Beta-lactamase; PFAM: Beta-lactamase.
 
    0.479
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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