STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48753.1InterPro IPR011576; KEGG: kfl:Kfla_2374 pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein; PFAM: Pyridoxamine 5'-phosphate oxidase. (173 aa)    
Predicted Functional Partners:
dxr
1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.
       0.708
ADU47161.1
Methyltransferase type 11; InterPro IPR013216; KEGG: tcu:Tcur_4465 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain.
  
     0.620
ADU48751.1
Peptidase M50; COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR001478: IPR008915; KEGG: kse:Ksed_11310 predicted membrane-associated Zn-dependent protease; PFAM: peptidase M50; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: Predicted membrane-associated Zn-dependent protease; PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP.
       0.582
ADU48754.1
Guanine-specific ribonuclease N1 and T1; COGs: COG4290 Guanyl-specific ribonuclease Sa; InterPro IPR000026; KEGG: ach:Achl_0858 guanine-specific ribonuclease N1 and T1; PFAM: guanine-specific ribonuclease N1 and T1; SPTR: Guanyl-specific ribonuclease SA; PFAM: ribonuclease.
       0.554
ADU48755.1
Barstar (barnase inhibitor); InterPro IPR000468; KEGG: xac:XAC2388 hypothetical protein; PFAM: Barstar (barnase inhibitor); SPTR: Putative uncharacterized protein; PFAM: Barstar (barnase inhibitor).
       0.554
ADU48911.1
KEGG: cai:Caci_1075 phosphotransferase (aminonucleoside antibiotic resistance); SPTR: Phosphotransferase (Aminonucleoside antibiotic resistance).
  
     0.546
ADU49848.1
Putative F420-dependent enzyme; InterPro IPR019967: IPR011576; KEGG: svi:Svir_19860 pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; SPTR: Pyridoxamine 5'-phosphate oxidase family protein; TIGRFAM: putative F420-dependent enzyme; PFAM: Pyridoxamine 5'-phosphate oxidase; TIGRFAM: PPOX class probable F420-dependent enzyme, Rv0121 family.
  
   
 0.531
ADU47184.1
Methyltransferase type 11; COGs: COG2230 Cyclopropane fatty acid synthase and related methyltransferase; InterPro IPR013216; KEGG: sma:SAV_3886 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase.
  
     0.502
ADU49794.1
Hypothetical protein; COGs: COG2045 Phosphosulfolactate phosphohydrolase; KEGG: tpr:Tpau_2411 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: 2-phosphosulpholactate phosphatase; Belongs to the ComB family.
  
     0.496
ADU48096.1
Extracellular solute-binding protein family 5; COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: kse:Ksed_12470 ABC-type dipeptide transport system, periplasmic component; PFAM: extracellular solute-binding protein family 5; SPTR: ABC-type dipeptide transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle.
  
     0.485
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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