STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48767.1Auxin Efflux Carrier; COGs: COG0679 permease; InterPro IPR004776; KEGG: kse:Ksed_17720 predicted permease; PFAM: Auxin Efflux Carrier; SPTR: Putative transport integral membrane protein; PFAM: Membrane transport protein. (312 aa)    
Predicted Functional Partners:
ADU47130.1
Malic protein NAD-binding protein; COGs: COG0281 Malic enzyme; InterPro IPR012301: IPR012302: IPR001891; KEGG: nca:Noca_0113 malate dehydrogenase; PFAM: malic protein NAD-binding; malic protein domain protein; SPTR: Malate dehydrogenase (Oxaloacetate-decarboxylating); PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain.
  
  
 0.635
ADU49029.1
Malic protein NAD-binding protein; COGs: COG0281 Malic enzyme; InterPro IPR012301: IPR012302: IPR005829: IPR015884; KEGG: fre:Franean1_0980 malate dehydrogenase; PFAM: malic protein NAD-binding; malic protein domain protein; SPTR: Putative malate oxidoreductase; PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain.
  
  
 0.635
ADU49353.1
Malic protein NAD-binding protein; COGs: COG0281 Malic enzyme; InterPro IPR001891: IPR002912: IPR012301: IPR012302; KEGG: nca:Noca_2034 malate dehydrogenase; PFAM: malic protein NAD-binding; malic protein domain protein; amino acid-binding ACT domain protein; SPTR: Malate dehydrogenase (Oxaloacetate-decarboxylating); PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain.
  
  
 0.635
ADU48768.1
KEGG: kse:Ksed_11250 predicted Rossmann fold nucleotide-binding protein; SPTR: Putative uncharacterized protein; PFAM: Possible lysine decarboxylase.
       0.552
ADU47222.1
NUDIX hydrolase; InterPro IPR000086; KEGG: cfl:Cfla_2802 NUDIX hydrolase; PFAM: NUDIX hydrolase; SPTR: NUDIX hydrolase; PFAM: NUDIX domain.
  
     0.414
ADU48769.1
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
       0.408
ADU48770.1
Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR017200: IPR007197; KEGG: nca:Noca_4381 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily.
  
    0.402
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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