STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48768.1KEGG: kse:Ksed_11250 predicted Rossmann fold nucleotide-binding protein; SPTR: Putative uncharacterized protein; PFAM: Possible lysine decarboxylase. (406 aa)    
Predicted Functional Partners:
ADU48770.1
Radical SAM domain protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR017200: IPR007197; KEGG: nca:Noca_4381 radical SAM domain-containing protein; PFAM: Radical SAM domain protein; SPTR: Radical SAM domain protein; PFAM: Radical SAM superfamily.
  
    0.555
ADU48767.1
Auxin Efflux Carrier; COGs: COG0679 permease; InterPro IPR004776; KEGG: kse:Ksed_17720 predicted permease; PFAM: Auxin Efflux Carrier; SPTR: Putative transport integral membrane protein; PFAM: Membrane transport protein.
       0.551
ADU48769.1
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
       0.551
ADU48556.1
COGs: COG0557 Exoribonuclease R; InterPro IPR001900; KEGG: kse:Ksed_12120 exoribonuclease R; PFAM: ribonuclease II; SPTR: Putative ribonuclease R; PFAM: RNB domain.
 
    0.499
ADU47871.1
KEGG: kse:Ksed_08960 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.498
ADU46761.1
KEGG: kse:Ksed_01720 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.448
ADU47831.1
RDD domain containing protein; InterPro IPR018929: IPR010432; KEGG: kra:Krad_3769 RDD domain containing protein; PFAM: RDD domain containing protein; Protein of unknown function DUF2510; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF2510); RDD family.
 
     0.424
ADU47957.1
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
  
    0.404
ADU48739.1
6-kinase; COGs: COG3570 Streptomycin 6-kinase; InterPro IPR006748; KEGG: kfl:Kfla_2389 antimicrobial 6-kinase; PFAM: aminoglycoside/hydroxyurea antibiotic resistance kinase; PRIAM: Streptomycin 6-kinase; SPTR: Antimicrobial 6-kinase; PFAM: Aminoglycoside/hydroxyurea antibiotic resistance kinase.
  
     0.404
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.