STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48787.1Peptidase M23; InterPro IPR016047; KEGG: rer:RER_25410 hypothetical protein; PFAM: Peptidase M23; SPTR: M23 peptidase domain protein; PFAM: Peptidase family M23. (188 aa)    
Predicted Functional Partners:
ADU48786.1
Succinyldiaminopimelate aminotransferase apoenzyme; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839: IPR001176; KEGG: stp:Strop_3861 aminotransferase; PFAM: aminotransferase class I and II; SPTR: Putative uncharacterized protein; PFAM: Aminotransferase class I and II.
       0.538
ADU47815.1
Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: cfl:Cfla_1246 peptidase M23; PFAM: Peptidase M23; SPTR: Putative uncharacterized protein; PFAM: Peptidase family M23.
 
    
 0.537
ADU49083.1
KEGG: nca:Noca_4334 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.534
rpsB
COGs: COG0052 Ribosomal protein S2; InterPro IPR005706: IPR018130: IPR001865; KEGG: xce:Xcel_1180 ribosomal protein S2; PFAM: ribosomal protein S2; SPTR: 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; Belongs to the universal ribosomal protein uS2 family.
     
 0.480
ADU46663.1
Hypothetical protein; COGs: COG2068 Uncharacterized MobA-related protein; KEGG: nca:Noca_3976 hypothetical protein; SPTR: Putative uncharacterized protein.
   
    0.477
ADU48785.1
KEGG: art:Arth_2689 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.477
disA
Protein of unknown function DUF147; Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP likely acts as a signaling molecule that may couple DNA integrity with a cellular process.
     
 0.470
ADU49064.1
UvrD/REP helicase; COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR014016: IPR014017: IPR000212; KEGG: kra:Krad_1171 UvrD/REP helicase; PFAM: UvrD/REP helicase; SPTR: Putative ATP-dependent DNA helicase; PFAM: UvrD/REP helicase.
 
     0.447
ADU49049.1
COGs: COG5282 conserved hypothetical protein; InterPro IPR018766; KEGG: kse:Ksed_19090 hypothetical protein; PFAM: Protein of unknown function DUF2342; SPTR: Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein; PFAM: Uncharacterised conserved protein (DUF2342); TIGRFAM: putative hydrolase.
  
     0.446
ADU47066.1
Type II secretion system F domain; InterPro IPR018076; KEGG: kse:Ksed_25280 Flp pilus assembly protein TadC; PFAM: Type II secretion system F domain; SPTR: Putative uncharacterized protein; PFAM: Bacterial type II secretion system protein F domain.
  
     0.439
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.