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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48816.1COGs: COG1835 acyltransferase; InterPro IPR002656; KEGG: bcv:Bcav_3022 acyltransferase 3; PFAM: acyltransferase 3; SPTR: Lipopolysaccharide modification acyltransferase; PFAM: Acyltransferase family. (673 aa)    
Predicted Functional Partners:
ADU48815.1
COGs: COG1254 Acylphosphatase; InterPro IPR017968: IPR001792: IPR020456; KEGG: kse:Ksed_10920 acylphosphatase; PFAM: acylphosphatase; SPTR: Acylphosphatase; PFAM: Acylphosphatase.
       0.547
ADU48005.1
COGs: COG2251 nuclease (RecB family); InterPro IPR019993; KEGG: gob:Gobs_3698 RecB family nuclease, putative; SPTR: RecB family nuclease, putative; TIGRFAM: RecB family nuclease, putative; TIGRFAM: RecB family nuclease, putative, TM0106 family.
  
    0.544
ADU50046.1
Nuclease (SNase domain-containing protein); COGs: COG1525 Micrococcal nuclease (thermonuclease) homologs; InterPro IPR006021: IPR002071; KEGG: kse:Ksed_15970 micrococcal nuclease-like nuclease; PFAM: nuclease (SNase domain-containing protein); SMART: nuclease (SNase domain-containing protein); SPTR: Micrococcal nuclease-like nuclease; PFAM: Staphylococcal nuclease homologue.
  
  
 0.413
ADU48814.1
COGs: COG1605 Chorismate mutase; InterPro IPR010951: IPR002701: IPR020822; KEGG: sgr:SGR_5509 chorismate mutase; PFAM: Chorismate mutase, type II; SPTR: Chorismate mutase; TIGRFAM: chorismate mutase; PFAM: Chorismate mutase type II; TIGRFAM: monofunctional chorismate mutase, alpha proteobacterial type.
       0.400
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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