STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADU48843.1ErfK/YbiS/YcfS/YnhG family protein; InterPro IPR002477: IPR005490; KEGG: nca:Noca_0518 peptidoglycan binding domain-containing protein; PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; SPTR: Lipoprotein; PFAM: Putative peptidoglycan binding domain; L,D-transpeptidase catalytic domain. (202 aa)    
Predicted Functional Partners:
ADU48225.1
Alanine racemase domain protein; InterPro IPR000408: IPR001608; KEGG: nca:Noca_4674 alanine racemase domain-containing protein; PFAM: alanine racemase domain protein; SPTR: Alanine racemase domain protein; PFAM: Alanine racemase, N-terminal domain.
  
   
 0.780
ADU48226.1
Methicillin resistance protein; COGs: COG2348 Uncharacterized protein involved in methicillin resistance; InterPro IPR003447; KEGG: kfl:Kfla_7010 methicillin resistance protein; PFAM: Methicillin resistance protein; SPTR: Methicillin resistance protein; PFAM: FemAB family.
  
     0.772
ADU48009.1
Methicillin resistance protein; COGs: COG2348 Uncharacterized protein involved in methicillin resistance; InterPro IPR003447; KEGG: kfl:Kfla_7010 methicillin resistance protein; PFAM: Methicillin resistance protein; SPTR: Putative uncharacterized protein; PFAM: FemAB family.
  
     0.769
ADU48403.1
InterPro IPR002563; KEGG: nca:Noca_3103 flavin reductase domain-containing protein; PFAM: flavin reductase domain protein FMN-binding; SPTR: Flavin reductase domain protein, FMN-binding; PFAM: Flavin reductase like domain.
  
     0.717
ADU47861.1
KEGG: nca:Noca_3344 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.559
ADU48842.1
KEGG: lel:LELG_03951 hypothetical protein; SPTR: Predicted protein.
       0.539
ADU49089.1
Hypothetical protein; InterPro IPR006311; KEGG: sru:SRU_2417 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Extensin-like protein C-terminus.
 
     0.527
fgd
Glucose-6-phosphate dehydrogenase, F420-dependent; Catalyzes the coenzyme F420-dependent oxidation of glucose 6- phosphate (G6P) to 6-phosphogluconolactone.
       0.499
ADU46689.1
COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR007887: IPR001460: IPR002137; KEGG: nca:Noca_4600 penicillin-binding protein, transpeptidase; PFAM: penicillin-binding protein transpeptidase; NTF2 domain protein transpeptidase; SPTR: Penicillin-binding protein, transpeptidase; PFAM: Penicillin binding protein transpeptidase domain; NTF2-like N-terminal transpeptidase domain; Penicillin-binding Protein dimerisation domain.
  
   
 0.467
ADU50041.1
phospholipase/Carboxylesterase; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR003140; KEGG: kfl:Kfla_4635 peptidase S9 prolyl oligopeptidase active site domain protein; PFAM: phospholipase/Carboxylesterase; SPTR: Peptidase S9 prolyl oligopeptidase active site domain protein; PFAM: Prolyl oligopeptidase family.
  
     0.460
Your Current Organism:
Intrasporangium calvum
NCBI taxonomy Id: 710696
Other names: I. calvum DSM 43043, Intrasporangium calvum DSM 43043, Intrasporangium calvum IFO 12989, Intrasporangium calvum NBRC 12989, Intrasporangium calvum str. DSM 43043, Intrasporangium calvum strain DSM 43043
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.